RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 CLTBP09497 229 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 FAM200BP0CF97 657 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 PRR35P0CG20 571 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 TSPY3P0CV98 308 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 TSPY8P0CW00 308 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 HGFP14210 728 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 HOXC8P31273 242 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 HNF1BP35680 557 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 PPARGP37231 505 aaPredicted RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 HADHAP40939 763 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 CAPZA2P47755 286 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 MTNR1AP48039 350 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 CTCFP49711 727 aaPredicted RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 RAC3P60763 192 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 TSPY1Q01534 308 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 LRMPQ12912 555 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 KRT24Q2M2I5 525 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 ERCC6LQ2NKX8 1250 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 RUNDC3AQ59EK9 446 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 ARHGAP40Q5TG30 622 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 METRNLQ641Q3 311 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 ANKS6Q68DC2 871 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 JADE1Q6IE81 842 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 RGS7BPQ6MZT1 257 aaPredicted RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 TATDN1Q6P1N9 297 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 SLC22A25Q6T423 547 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 RAPH1Q70E73 1250 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 FAM124AQ86V42 546 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 BRSK2Q8IWQ3 736 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.37□□□□□ -2.039e-7■■□□□ 13.8
PDE4D-218ENST00000509368 LMNTD2Q8IXW0 634 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 MAML2Q8IZL2 1156 aaPredicted RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 CARFQ8N187 725 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 POC5Q8NA72 575 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 Q8NA96 180 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 TXNDC5Q8NBS9 432 aaKnown RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 SRFBP1Q8NEF9 429 aaKnown RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 OR14K1Q8NGZ2 314 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 NPIPB3Q92617 1050 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 FAM136AQ96C01 138 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 JAKMIP1Q96N16 626 aaKnown RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 TUBB6Q9BUF5 446 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 HTATIP2Q9BUP3 242 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 CINPQ9BW66 212 aaPredicted RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 EPC1Q9H2F5 836 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 OSGEPL1Q9H4B0 414 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 DENND2DQ9H6A0 471 aaPredicted RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 THAP1Q9NVV9 213 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 SELENONQ9NZV5 590 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 EXO1Q9UQ84 846 aaKnown RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 CLDN16Q9Y5I7 305 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 ABCC6O95255 1503 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 ERVK-7P63135 1459 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 NALCNQ8IZF0 1738 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 ROBO1Q9Y6N7 1651 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 TRPM2O94759 1503 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 TRIM24O15164 1050 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 PAGE4O60829 102 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 DAB1O75553 588 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 OR2C1O95371 312 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 ITGB1P05556 798 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 URODP06132 367 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 FYNP06241 537 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 TMIGD3P0DMS9 266 aaPredicted RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 TMEM11P17152 192 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 BMP7P18075 431 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 SLC6A2P23975 617 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 MSX2P35548 267 aaPredicted RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 GGT5P36269 586 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 RRP1P56182 461 aaKnown RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 NXPH1P58417 271 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 YWHAHQ04917 246 aaPredicted RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 ABHD18Q0P651 414 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 OLIG2Q13516 323 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 ALKBH1Q13686 389 aaKnown RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 NAA25Q14CX7 972 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 PCGF3Q3KNV8 242 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 GLE1Q53GS7 698 aaKnown RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 FAM102AQ5T9C2 384 aaPredicted RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 VWA5B1Q5TIE3 1220 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 FAM171A1Q5VUB5 890 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 DAB2IPQ5VWQ8 1189 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 ADALQ6DHV7 355 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 TMEM81Q6P7N7 255 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 MAMDC4Q6UXC1 1216 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 CLEC9AQ6UXN8 241 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 EPHX4Q8IUS5 362 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 MCEMP1Q8IX19 187 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 C17orf53Q8N3J3 647 aaPredicted RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 FRMD1Q8N878 549 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 PNPLA1Q8N8W4 532 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 LINC01356Q8N9X3 169 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 BEND2Q8NDZ0 799 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 WIPF2Q8TF74 440 aaPredicted RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 SOCS4Q8WXH5 440 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 SLC22A18Q96BI1 424 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 PRR11Q96HE9 360 aaPredicted RBP2.37□□□□□ -2.03
PDE4D-218ENST00000509368 PHACTR3Q96KR7 559 aa2.37□□□□□ -2.03
PDE4D-218ENST00000509368 TSPAN18Q96SJ8 248 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms