RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-225	ENST00000508476	LIAS	O43766	372 aa		4.99	□□□□□ -1.61
UBE2D3-225	ENST00000508476	PAPSS2	O95340	614 aa	Predicted RBP	4.99	□□□□□ -1.61
UBE2D3-225	ENST00000508476	AVPR1A	P37288	418 aa		4.99	□□□□□ -1.61
UBE2D3-225	ENST00000508476	PDLIM4	P50479	330 aa		4.99	□□□□□ -1.61
UBE2D3-225	ENST00000508476	PRKAA2	P54646	552 aa		4.99	□□□□□ -1.61
UBE2D3-225	ENST00000508476	ZP1	P60852	638 aa		4.99	□□□□□ -1.61
UBE2D3-225	ENST00000508476	HNF4G	Q14541	408 aa		4.99	□□□□□ -1.61
UBE2D3-225	ENST00000508476	RBM23	Q86U06	439 aa	Known RBP	4.99	□□□□□ -1.61
UBE2D3-225	ENST00000508476	CEP76	Q8TAP6	659 aa		4.99	□□□□□ -1.61
UBE2D3-225	ENST00000508476	DDX23	Q9BUQ8	820 aa	Known RBP	4.99	□□□□□ -1.61
UBE2D3-225	ENST00000508476	CATSPERB	Q9H7T0	1116 aa		4.99	□□□□□ -1.61
UBE2D3-225	ENST00000508476	UPB1	Q9UBR1	384 aa		4.99	□□□□□ -1.61
UBE2D3-225	ENST00000508476	BAG5	Q9UL15	447 aa		4.99	□□□□□ -1.61
UBE2D3-225	ENST00000508476	CLEC18A	A5D8T8	446 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	PRSS44	E7EML9	344 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	HNRNPR	O43390	633 aa	Known RBP	4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	LDB2	O43679	373 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	KRT38	O76015	456 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	TMCC1	O94876	653 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	DDAH2	O95865	285 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	TGFB3	P10600	412 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	THPO	P40225	353 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	DSCR9	P59020	149 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	TRIM14	Q14142	442 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	TIGD6	Q17RP2	521 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	ZNF284	Q2VY69	593 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	TUBB8	Q3ZCM7	444 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	PRAMEF19	Q5SWL8	479 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	OTUD1	Q5VV17	481 aa	Predicted RBP	4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	C18orf65	Q6ZTR6	163 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	BRSK2	Q8IWQ3	736 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	CLEC18C	Q8NCF0	446 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	PHF21B	Q96EK2	531 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	LMLN	Q96KR4	655 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	MEIS3	Q99687	375 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	PCGF6	Q9BYE7	350 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	RMI1	Q9H9A7	625 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	PLEKHA2	Q9HB19	425 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	SELENON	Q9NZV5	590 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	TAGLN3	Q9UI15	199 aa		4.98	□□□□□ -1.61
UBE2D3-225	ENST00000508476	EVPL	Q92817	2033 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	DDTL	A6NHG4	134 aa	Predicted RBP	4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	MS4A18	H0YCH9	400 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	IPO5	O00410	1097 aa	Known RBP	4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	HLA-DQA2	P01906	255 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	CSF1	P09603	554 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	ARSA	P15289	507 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	PRKCH	P24723	683 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	HOXD3	P31249	432 aa	Predicted RBP	4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	BLMH	Q13867	455 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	UBE4A	Q14139	1066 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	KEAP1	Q14145	624 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	NFATC4	Q14934	902 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	CCDC38	Q502W7	563 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	TANGO2	Q6ICL3	276 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	JMJD6	Q6NYC1	403 aa	Predicted RBP	4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	PDXDC1	Q6P996	788 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	GALNT7	Q86SF2	657 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	SPICE1	Q8N0Z3	855 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	SCAI	Q8N9R8	606 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	FAR1	Q8WVX9	515 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	CADM1	Q9BY67	442 aa	Known RBP	4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	SEZ6L	Q9BYH1	1024 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	TAF1D	Q9H5J8	278 aa	Predicted RBP	4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	TLR8	Q9NR97	1041 aa	Known RBP	4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	THAP1	Q9NVV9	213 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	WNT16	Q9UBV4	365 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	SRP68	Q9UHB9	627 aa	Known RBP	4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	ICK	Q9UPZ9	632 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	RAI2	Q9Y5P3	530 aa		4.97	□□□□□ -1.61
UBE2D3-225	ENST00000508476	TARSL2	A2RTX5	802 aa	Known RBP	4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476		E7EVH7	732 aa		4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	HSPB6	O14558	160 aa		4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	CLDN7	O95471	211 aa		4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	FGF3	P11487	239 aa	Predicted RBP	4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	CYP4B1	P13584	511 aa		4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	VEGFA	P15692	232 aa	Predicted RBP	4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	ITGB8	P26012	769 aa		4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	HDAC1	Q13547	482 aa	Predicted RBP	4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	FSCB	Q5H9T9	825 aa		4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	CAPRIN2	Q6IMN6	1127 aa	Known RBP	4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	HEPHL1	Q6MZM0	1159 aa		4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	CCDC174	Q6PII3	467 aa		4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	DLK2	Q6UY11	383 aa		4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	WDR5B	Q86VZ2	330 aa		4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	MYLK4	Q86YV6	388 aa	Predicted RBP	4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	NEXN-AS1	Q8NBZ9	246 aa		4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	LMO3	Q8TAP4	145 aa		4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	BICD2	Q8TD16	824 aa		4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	FAM84B	Q96KN1	310 aa	Predicted RBP	4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	FRG2B	Q96QU4	278 aa		4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	IFT27	Q9BW83	186 aa		4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	OSGIN2	Q9Y236	505 aa		4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	MST1R	Q04912	1400 aa		4.96	□□□□□ -1.62
UBE2D3-225	ENST00000508476	SAC3D1	A6NKF1	404 aa		4.95	□□□□□ -1.62
UBE2D3-225	ENST00000508476	KCNJ4	P48050	445 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms