RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 ARHGEF38Q9NXL2 777 aa8.19□□□□□ -1.1
UBE2D3-222ENST00000508238 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.19□□□□□ -1.1
UBE2D3-222ENST00000508238 ADAMTS1Q9UHI8 967 aa8.19□□□□□ -1.1
UBE2D3-222ENST00000508238 SLCO3A1Q9UIG8 710 aa8.19□□□□□ -1.1
UBE2D3-222ENST00000508238 TMEM59LQ9UK28 342 aa8.19□□□□□ -1.1
UBE2D3-222ENST00000508238 NOCTQ9UK39 431 aaKnown RBP8.19□□□□□ -1.1
UBE2D3-222ENST00000508238 ANGPTL2Q9UKU9 493 aa8.19□□□□□ -1.1
UBE2D3-222ENST00000508238 STAP1Q9ULZ2 295 aa8.19□□□□□ -1.1
UBE2D3-222ENST00000508238 WASF3Q9UPY6 502 aa8.19□□□□□ -1.1
UBE2D3-222ENST00000508238 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.19□□□□□ -1.1
UBE2D3-222ENST00000508238 PAXBP1Q9Y5B6 917 aa8.19□□□□□ -1.1
UBE2D3-222ENST00000508238 OR51B4Q9Y5P0 310 aa8.19□□□□□ -1.1
UBE2D3-222ENST00000508238 ATXN2Q99700 1313 aaKnown RBP8.19□□□□□ -1.1
UBE2D3-222ENST00000508238 CHD5Q8TDI0 1954 aa8.19□□□□□ -1.1
UBE2D3-222ENST00000508238 TRPM6Q9BX84 2022 aa8.19□□□□□ -1.1
UBE2D3-222ENST00000508238 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 A0A1W2PNR3 127 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 DRGXA6NNA5 263 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 MEI4A8MW99 385 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 TTC34A8MYJ7 566 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 I6L893 689 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 PES1O00541 588 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 RNASEH1O60930 286 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 SIN3BO75182 1162 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 ENDOD1O94919 500 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 SEMA4FO95754 770 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 CYP1A1P04798 512 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 TPM2P07951 284 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 ZNF883P0CG24 379 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 CD59P13987 128 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 ZNF18P17022 549 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 MMP8P22894 467 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 NNMTP40261 264 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 JAM2P57087 298 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 NOMO3P69849 1222 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 CDR2Q01850 454 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 NME3Q13232 169 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 ZNF177Q13360 481 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 ELAVL3Q14576 367 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 CST6Q15828 149 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 UAP1L1Q3KQV9 507 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 FKBP15Q5T1M5 1219 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 ARTNQ5T4W7 220 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 SASS6Q6UVJ0 657 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 IL27RAQ6UWB1 636 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 DBX2Q6ZNG2 339 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 ZNF683Q8IZ20 524 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 MSANTD4Q8NCY6 345 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 FRS2Q8WU20 508 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 PTPRN2Q92932 1015 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 FAM131CQ96AQ9 280 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 CNTNAP3BQ96NU0 1288 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 RPRD1AQ96P16 312 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 ORAI3Q9BRQ5 295 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 GTPBP2Q9BX10 602 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 CNTNAP3Q9BZ76 1288 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 PDCL3Q9H2J4 239 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 MTG2Q9H4K7 406 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 SLC32A1Q9H598 525 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 C6orf106Q9H6K1 298 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 NEUROD4Q9HD90 331 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 PIGVQ9NUD9 493 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 TAB2Q9NYJ8 693 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 LIMA1Q9UHB6 759 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 EGFL7Q9UHF1 273 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 EIF2B4Q9UI10 523 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 FZD4Q9ULV1 537 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 TPX2Q9ULW0 747 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 NCKAP1Q9Y2A7 1128 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 SIK3Q9Y2K2 1263 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 HS3ST4Q9Y661 456 aa8.18□□□□□ -1.1
UBE2D3-222ENST00000508238 IGLV3-10A0A075B6K4 115 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 SYNJ2BP-COX16A0A087WUM0 186 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 LGALS16A8MUM7 142 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 ICMTO60725 284 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 ADCY5O95622 1261 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 MBD3O95983 291 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 MMEP08473 750 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 PDGFRAP16234 1089 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 GOT1P17174 413 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 CHRNB2P17787 502 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 TFE3P19532 575 aaPredicted RBP8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 C5AR1P21730 350 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 CD27P26842 260 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 MZF1P28698 734 aaPredicted RBP8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 SOX5P35711 763 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 FLT3P36888 993 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 AFF3P51826 1226 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 COPB1P53618 953 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 CDH4P55283 916 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 RNASE9P60153 205 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 POLR2FP61218 127 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 BNC1Q01954 994 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 MYL5Q02045 173 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 GRIK2Q13002 908 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 NCAPHQ15003 741 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 STX1AQ16623 288 aa8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 FAM102AQ5T9C2 384 aaPredicted RBP8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 RNF219Q5W0B1 726 aaPredicted RBP8.17□□□□□ -1.1
UBE2D3-222ENST00000508238 TRIM72Q6ZMU5 477 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms