RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, human

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-210	ENST00000507965	APOBEC3G	Q9HC16	384 aa	Known RBP	5.81	□□□□□ -1.48
ATXN3-210	ENST00000507965	TLR8	Q9NR97	1041 aa	Known RBP	5.81	□□□□□ -1.48
ATXN3-210	ENST00000507965	USP36	Q9P275	1121 aa	Known RBP	5.81	□□□□□ -1.48
ATXN3-210	ENST00000507965	GGT7	Q9UJ14	662 aa		5.81	□□□□□ -1.48
ATXN3-210	ENST00000507965	RASAL2	Q9UJF2	1139 aa		5.81	□□□□□ -1.48
ATXN3-210	ENST00000507965	CLEC4E	Q9ULY5	219 aa		5.81	□□□□□ -1.48
ATXN3-210	ENST00000507965	STON1	Q9Y6Q2	735 aa		5.81	□□□□□ -1.48
ATXN3-210	ENST00000507965	PCNX2	A6NKB5	2137 aa		5.81	□□□□□ -1.48
ATXN3-210	ENST00000507965	NUMA1	Q14980	2115 aa		5.81	□□□□□ -1.48
ATXN3-210	ENST00000507965	CACNA1E	Q15878	2313 aa		5.81	□□□□□ -1.48
ATXN3-210	ENST00000507965	FITM1	A5D6W6	292 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	FAM221B	A6H8Z2	402 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	NDUFS2	O75306	463 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	ZNF217	O75362	1048 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	ASS1	P00966	412 aa	Known RBP	5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	PENK	P01210	267 aa	Predicted RBP	5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	HLA-DRA	P01903	254 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	NR3C1	P04150	777 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	NCAM1	P13591	858 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	CD6	P30203	668 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	CORO1A	P31146	461 aa	Known RBP	5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	ATP5C1	P36542	298 aa	Known RBP	5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	COPA	P53621	1224 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	MFAP3	P55082	362 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	AMPD3	Q01432	767 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	EGR3	Q06889	387 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	INCA1	Q0VD86	236 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	SCAP	Q12770	1279 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	PKP1	Q13835	747 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	ACAP1	Q15027	740 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	TRIP6	Q15654	476 aa	Known RBP	5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	COL28A1	Q2UY09	1125 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	WIPI1	Q5MNZ9	446 aa	Predicted RBP	5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	DCAF12L1	Q5VU92	463 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	RESP18	Q5W5W9	173 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	TMEM215	Q68D42	235 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	SDE2	Q6IQ49	451 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	RABEPK	Q7Z6M1	372 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	FAM124A	Q86V42	546 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	CRYBG2	Q8N1P7	616 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	ZNF366	Q8N895	744 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	MDM1	Q8TC05	714 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	TAS1R2	Q8TE23	839 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	TOE1	Q96GM8	510 aa	Known RBP	5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	ZNF419	Q96HQ0	510 aa	Predicted RBP	5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	INTS4	Q96HW7	963 aa	Known RBP	5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	XPO6	Q96QU8	1125 aa	Known RBP	5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	RSRP1	Q9BUV0	290 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	GPR174	Q9BXC1	333 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	MIR1-1HG	Q9H1L0	117 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	KCTD10	Q9H3F6	313 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	FBXO44	Q9H4M3	255 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	MMRN2	Q9H8L6	949 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	MAGEF1	Q9HAY2	307 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	PRDM16	Q9HAZ2	1276 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	DMAC2	Q9NW81	257 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	COMMD8	Q9NX08	183 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	WDR35	Q9P2L0	1181 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	DUSP13	Q9UII6	198 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	LSM7	Q9UK45	103 aa	Known RBP	5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	PCDHA7	Q9UN72	937 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	SCML2	Q9UQR0	700 aa		5.8	□□□□□ -1.48
ATXN3-210	ENST00000507965	FREM2	Q5SZK8	3169 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	NBEA	Q8NFP9	2946 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	ZFYVE26	Q68DK2	2539 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	PVALEF	A0A1B0GWK0	134 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965		H0Y626	953 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	TRIM13	O60858	407 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	CBFA2T3	O75081	653 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	CILP	O75339	1184 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	KIF20A	O95235	890 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	TRIM16	O95361	564 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	SYP	P08247	313 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	CELA3A	P09093	270 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	ZGLP1	P0C6A0	271 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	HLA-E	P13747	358 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	ETV3	P41162	512 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	ME1	P48163	572 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	GCLM	P48507	274 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	TPMT	P51580	245 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	SGSH	P51688	502 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	SNRPF	P62306	86 aa	Known RBP	5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	PPP3CA	Q08209	521 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	GOLGA8F	Q08AF8	430 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	GOLGA8DP	Q0D2H9	430 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	EFEMP1	Q12805	493 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	ENPP2	Q13822	863 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	ZNF234	Q14588	700 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	PREPL	Q4J6C6	727 aa	Predicted RBP	5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	KRTAP5-3	Q6L8H2	238 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	CCDC186	Q7Z3E2	898 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	SLCO6A1	Q86UG4	719 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	UNC93A	Q86WB7	457 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	DENND1C	Q8IV53	801 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	RBBP8NL	Q8NC74	664 aa	Predicted RBP	5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	ADAMTS14	Q8WXS8	1223 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	SNX19	Q92543	992 aa		5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	NDRG1	Q92597	394 aa	Known RBP	5.79	□□□□□ -1.48
ATXN3-210	ENST00000507965	CYFIP2	Q96F07	1278 aa		5.79	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms