RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 VAV1P15498 845 aa14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 GGCXP38435 758 aa14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 PTPN9P43378 593 aa14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 NSFP46459 744 aaKnown RBP14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 MAPKAPK2P49137 400 aa14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 JAM2P57087 298 aa14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 NXPH1P58417 271 aa14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 CNTN1Q12860 1018 aa14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 STX1AQ16623 288 aa14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 AGBL4Q5VU57 503 aa14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 PLPP6Q8IY26 295 aa14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 OR52K2Q8NGK3 314 aa14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 CPA5Q8WXQ8 436 aa14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 LRIG1Q96JA1 1093 aa14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 PCMTD1Q96MG8 357 aaPredicted RBP14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 CFAP57Q96MR6 1250 aa14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 PSMB7Q99436 277 aa14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 OSBPL2Q9H1P3 480 aa14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 FAM207AQ9NSI2 230 aaPredicted RBP14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 DONSONQ9NYP3 566 aa14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 LIMA1Q9UHB6 759 aaKnown RBP14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 NYNRINQ9P2P1 1898 aaKnown RBP14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 USP24Q9UPU5 2620 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 ANKRD62A6NC57 917 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 LRRC10BA6NIK2 292 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 KPNA3O00505 521 aaPredicted RBP14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 SRGAP2O75044 1071 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 TFE3P19532 575 aaPredicted RBP14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 CDK11BP21127 795 aaKnown RBP14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 IRAK1P51617 712 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 COPB1P53618 953 aaKnown RBP14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 FMO1Q01740 532 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 GNA12Q03113 381 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 C22orf39Q6P5X5 142 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 TFAP2DQ7Z6R9 452 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 SLCO6A1Q86UG4 719 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 FAM131BQ86XD5 332 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 OR2A12Q8NGT7 310 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 NTAN1Q96AB6 310 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 ISG20Q96AZ6 181 aaKnown RBP14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 HDAC8Q9BY41 377 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 NAT10Q9H0A0 1025 aaKnown RBP14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 EBF2Q9HAK2 575 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 ATP13A1Q9HD20 1204 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 METTL5Q9NRN9 209 aaKnown RBP14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 FANCLQ9NW38 375 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 MPP6Q9NZW5 540 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 IL36AQ9UHA7 158 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 SARDHQ9UL12 918 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 HPCAL4Q9UM19 191 aa14.75□□□□□ -0.05
HMGCS1-203ENST00000507004 ZSCAN5CA6NGD5 496 aaPredicted RBP14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 C2CD4BA6NLJ0 364 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 LGALS16A8MUM7 142 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 CBX4O00257 560 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 BNIP3LO60238 219 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 SNAP91O60641 907 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 RTN2O75298 545 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 WNT1P04628 370 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 ATXN1LP0C7T5 689 aaKnown RBP14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 KRT3P12035 628 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 UNGP13051 313 aaPredicted RBP14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 RHOQP17081 205 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 EPHA8P29322 1005 aaPredicted RBP14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 ADRA1BP35368 520 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 SERPINH1P50454 418 aaKnown RBP14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 AIF1P55008 147 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 PPP2CBP62714 309 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 PPP2CAP67775 309 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 ATP11AP98196 1134 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 ILKQ13418 452 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 LAYNQ6UX15 382 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 ERN2Q76MJ5 926 aaKnown RBP14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 TMPRSS12Q86WS5 348 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 PHF13Q86YI8 300 aaPredicted RBP14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 DCP2Q8IU60 420 aaKnown RBP14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 PNPLA1Q8N8W4 532 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 SAP25Q8TEE9 199 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 RXFP2Q8WXD0 754 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 KLHDC7BQ96G42 594 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 ERGIC2Q96RQ1 377 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 C11orf70Q9BRQ4 267 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 SPON2Q9BUD6 331 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 SELENOOQ9BVL4 669 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 MAGEH1Q9H213 219 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 CCDC86Q9H6F5 360 aaKnown RBP14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 NLRC4Q9NPP4 1024 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 ANLNQ9NQW6 1124 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 TOR4AQ9NXH8 423 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 ADAM22Q9P0K1 906 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 ARHGAP20Q9P2F6 1191 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 DKK4Q9UBT3 224 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 OR12D3Q9UGF7 316 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 BTBD3Q9Y2F9 522 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 SIK3Q9Y2K2 1263 aa14.74□□□□□ -0.05
HMGCS1-203ENST00000507004 COL5A1P20908 1838 aaPredicted RBP14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 A0A0D9SEW6 157 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 SRRM3A6NNA2 597 aaPredicted RBP14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 I6L893 689 aaPredicted RBP14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 KCNK3O14649 394 aa14.73□□□□□ -0.05
HMGCS1-203ENST00000507004 LDOC1O95751 146 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms