RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ARRDC1-AS1Q9H2J1 176 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 PABPC3Q9H361 631 aaKnown RBP17.05■□□□□ 0.32
SNCA-209ENST00000506244 MTG2Q9H4K7 406 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 WSB2Q9NYS7 404 aaPredicted RBP17.05■□□□□ 0.32
SNCA-209ENST00000506244 CHD5Q8TDI0 1954 aa17.05■□□□□ 0.32
SNCA-209ENST00000506244 THADAQ6YHU6 1953 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 BCLAF3A2AJT9 711 aaKnown RBP17.04■□□□□ 0.32
SNCA-209ENST00000506244 ZMPSTE24O75844 475 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 MTA2O94776 668 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 GOT1P17174 413 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 C5AR1P21730 350 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 GLDCP23378 1020 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 IL1R2P27930 398 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 ACVRL1P37023 503 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 ARHGAP25P42331 645 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 NDST2P52849 883 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 ARF5P84085 180 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 LMNB2Q03252 620 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 SPEM2Q0P670 501 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 CSRP2Q16527 193 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 KCNT1Q5JUK3 1230 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 SYCP2LQ5T4T6 812 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 DAB2IPQ5VWQ8 1189 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 MMAAQ8IVH4 418 aaKnown RBP17.04■□□□□ 0.32
SNCA-209ENST00000506244 TMEFF1Q8IYR6 380 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 LZTR1Q8N653 840 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 PCDH20Q8N6Y1 951 aaKnown RBP17.04■□□□□ 0.32
SNCA-209ENST00000506244 CADM4Q8NFZ8 388 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 GANCQ8TET4 914 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 CASKIN2Q8WXE0 1202 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 OMDQ99983 421 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 BTBD1Q9H0C5 482 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 SGK2Q9HBY8 427 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 VPS45Q9NRW7 570 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 RCOR3Q9P2K3 495 aaPredicted RBP17.04■□□□□ 0.32
SNCA-209ENST00000506244 FZD4Q9ULV1 537 aa17.04■□□□□ 0.32
SNCA-209ENST00000506244 ARHGAP42A6NI28 874 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 MEI4A8MW99 385 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 RASA4BC9J798 803 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 MCF2LO15068 1137 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 MID1O15344 667 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 RASA4O43374 803 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 LCA5LO95447 670 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 MT-CO1P00395 513 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 IL1BP01584 269 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 KRT7P08729 469 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 RARAP10276 462 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 VAV1P15498 845 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 FECHP22830 423 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 SERPINB6P35237 376 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 KRT81Q14533 505 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 WDR45BQ5MNZ6 344 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 ARMCX6Q7L4S7 300 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 DCLK2Q8N568 766 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 FRMD1Q8N878 549 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 SLC35G2Q8TBE7 412 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 ISG20Q96AZ6 181 aaKnown RBP17.03■□□□□ 0.32
SNCA-209ENST00000506244 HMCESQ96FZ2 354 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 HSPA12BQ96MM6 686 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 FAM129BQ96TA1 746 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 GPR174Q9BXC1 333 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 OSGEPQ9NPF4 335 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 CD93Q9NPY3 652 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 SEMA4GQ9NTN9 838 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 FBXL12Q9NXK8 326 aa17.03■□□□□ 0.32
SNCA-209ENST00000506244 PTPRZ1P23471 2315 aaPredicted RBP17.03■□□□□ 0.32
SNCA-209ENST00000506244 KDELR3O43731 214 aa17.02■□□□□ 0.32
SNCA-209ENST00000506244 BNIP3LO60238 219 aa17.02■□□□□ 0.32
SNCA-209ENST00000506244 RNASEH2AO75792 299 aaKnown RBP17.02■□□□□ 0.32
SNCA-209ENST00000506244 PRNPP04156 253 aa17.02■□□□□ 0.32
SNCA-209ENST00000506244 TCF4P15884 667 aa17.02■□□□□ 0.32
SNCA-209ENST00000506244 ERCC2P18074 760 aa17.02■□□□□ 0.32
SNCA-209ENST00000506244 SLC8A1P32418 973 aa17.02■□□□□ 0.32
SNCA-209ENST00000506244 MAGEA1P43355 309 aa17.02■□□□□ 0.32
SNCA-209ENST00000506244 ZNF33AQ06730 810 aa17.02■□□□□ 0.32
SNCA-209ENST00000506244 CCDC15Q0P6D6 951 aa17.02■□□□□ 0.32
SNCA-209ENST00000506244 SERINC3Q13530 473 aa17.02■□□□□ 0.32
SNCA-209ENST00000506244 DPYSQ14117 519 aa17.02■□□□□ 0.32
SNCA-209ENST00000506244 TCEAL1Q15170 157 aa17.02■□□□□ 0.32
SNCA-209ENST00000506244 PLA2G2CQ5R387 149 aa17.02■□□□□ 0.32
SNCA-209ENST00000506244 TMCO3Q6UWJ1 677 aa17.02■□□□□ 0.32
SNCA-209ENST00000506244 POLNQ7Z5Q5 900 aa17.02■□□□□ 0.32
SNCA-209ENST00000506244 FAM124AQ86V42 546 aa17.02■□□□□ 0.32
SNCA-209ENST00000506244 SYT12Q8IV01 421 aa17.02■□□□□ 0.32
SNCA-209ENST00000506244 MAP7D3Q8IWC1 876 aa17.02■□□□□ 0.32
SNCA-209ENST00000506244 C12orf50Q8NA57 414 aaPredicted RBP17.02■□□□□ 0.32
SNCA-209ENST00000506244 PPP1R16AQ96I34 528 aa17.02■□□□□ 0.32
SNCA-209ENST00000506244 NOL6Q9H6R4 1146 aaKnown RBP17.02■□□□□ 0.32
SNCA-209ENST00000506244 CWC15Q9P013 229 aaKnown RBP17.02■□□□□ 0.32
SNCA-209ENST00000506244 SUSD2Q9UGT4 822 aa17.02■□□□□ 0.32
SNCA-209ENST00000506244 ABCA7Q8IZY2 2146 aa17.02■□□□□ 0.31
SNCA-209ENST00000506244 TMEM110-MUSTN1A8MSY1 372 aa17.01■□□□□ 0.31
SNCA-209ENST00000506244 K7ERQ8 282 aa17.01■□□□□ 0.31
SNCA-209ENST00000506244 SLC7A4O43246 635 aa17.01■□□□□ 0.31
SNCA-209ENST00000506244 SMAD6O43541 496 aaKnown RBP17.01■□□□□ 0.31
SNCA-209ENST00000506244 BUB1O43683 1085 aa17.01■□□□□ 0.31
SNCA-209ENST00000506244 NDUFA10O95299 355 aa17.01■□□□□ 0.31
SNCA-209ENST00000506244 SEMA4FO95754 770 aa17.01■□□□□ 0.31
SNCA-209ENST00000506244 ZNF806P0C7X5 589 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms