RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 SMARCAD1Q9H4L7 1026 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 PDZD7Q9H5P4 517 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 COG4Q9H9E3 785 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 POLR1BQ9H9Y6 1135 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 WDR41Q9HAD4 459 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 GPRC5CQ9NQ84 441 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 TRAF6Q9Y4K3 522 aa13.51□□□□□ -0.25
LETM1-203ENST00000505551 GOLGA8IPA6NC78 632 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 GOLGA8JA6NMD2 632 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 F8VP50 259 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 NOL3O60936 208 aaKnown RBP13.5□□□□□ -0.25
LETM1-203ENST00000505551 FARP2O94887 1054 aaPredicted RBP13.5□□□□□ -0.25
LETM1-203ENST00000505551 BCL10O95999 233 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 PTPRAP18433 802 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 POLR2BP30876 1174 aaKnown RBP13.5□□□□□ -0.25
LETM1-203ENST00000505551 S100A5P33763 92 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 SERPINB5P36952 375 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 HPCAL1P37235 193 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 GRIA3P42263 894 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 SERPINB9P50453 376 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 SOX10P56693 466 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 BACE1P56817 501 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 DYNLT1P63172 113 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 NME3Q13232 169 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 DGKDQ16760 1214 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 SLC9B1Q4ZJI4 515 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 N4BP2L1Q5TBK1 243 aaPredicted RBP13.5□□□□□ -0.25
LETM1-203ENST00000505551 ARHGEF16Q5VV41 709 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 PPP4R4Q6NUP7 873 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 COLGALT2Q8IYK4 626 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 FAM71DQ8N9W8 422 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 OR7G1Q8NGA0 311 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 KMT5AQ9NQR1 393 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 TOPORSQ9NS56 1045 aaPredicted RBP13.5□□□□□ -0.25
LETM1-203ENST00000505551 ZC3H7BQ9UGR2 993 aaKnown RBP13.5□□□□□ -0.25
LETM1-203ENST00000505551 AFG3L2Q9Y4W6 797 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 CHADO15335 359 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 MSI1O43347 362 aaKnown RBP13.5□□□□□ -0.25
LETM1-203ENST00000505551 MYO1DO94832 1006 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 APOEP02649 317 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 CHRNB1P11230 501 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 BTF3P20290 206 aaKnown RBP13.5□□□□□ -0.25
LETM1-203ENST00000505551 CCNCP24863 283 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 TMBIM6P55061 237 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 SNRPFP62306 86 aaKnown RBP13.5□□□□□ -0.25
LETM1-203ENST00000505551 PRAMEP78395 509 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 SNRNP35Q16560 246 aaKnown RBP13.5□□□□□ -0.25
LETM1-203ENST00000505551 UGCGQ16739 394 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 ELMOD1Q8N336 334 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 GIPC2Q8TF65 315 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 POMGNT1Q8WZA1 660 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 LPAR1Q92633 364 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 NELL1Q92832 810 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 CIB1Q99828 191 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 TUBA1CQ9BQE3 449 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 TRPV6Q9H1D0 765 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 RNF146Q9NTX7 359 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 NXF1Q9UBU9 619 aaKnown RBP13.5□□□□□ -0.25
LETM1-203ENST00000505551 CNTNAP2Q9UHC6 1331 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 FER1L6Q2WGJ9 1857 aa13.5□□□□□ -0.25
LETM1-203ENST00000505551 FAM159BA6NKW6 160 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 TRIM38O00635 465 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 KMOO15229 486 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 SLC22A2O15244 555 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 CLOCKO15516 846 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 CFLARO15519 480 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 CST8O60676 142 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 GLRA3O75311 464 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 DDNO94850 711 aaPredicted RBP13.49□□□□□ -0.25
LETM1-203ENST00000505551 GNAO1P09471 354 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 DDX5P17844 614 aaKnown RBP13.49□□□□□ -0.25
LETM1-203ENST00000505551 TGM1P22735 817 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 HMBOX1Q6NT76 420 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 PADI6Q6TGC4 694 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 USP43Q70EL4 1123 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 C10orf107Q8IVU9 208 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 ABRAQ8N0Z2 381 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 MFSD2AQ8NA29 543 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 CALML6Q8TD86 181 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 DUS3LQ96G46 650 aaKnown RBP13.49□□□□□ -0.25
LETM1-203ENST00000505551 TCEAL9Q9UHQ7 104 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 C9IYK1 514 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 STX16-NPEPL1H3BU86 382 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 DHX15O43143 795 aaKnown RBP13.49□□□□□ -0.25
LETM1-203ENST00000505551 PLA2G6O60733 806 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 ZC3H11AO75152 810 aaKnown RBP eCLIP13.49□□□□□ -0.25
LETM1-203ENST00000505551 GUCY1B2O75343 617 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 PRKCGP05129 697 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 ENO3P13929 434 aaPredicted RBP13.49□□□□□ -0.25
LETM1-203ENST00000505551 RPS12P25398 132 aaKnown RBP13.49□□□□□ -0.25
LETM1-203ENST00000505551 MAP4P27816 1152 aaKnown RBP13.49□□□□□ -0.25
LETM1-203ENST00000505551 TPTEP56180 551 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 ADAM17P78536 824 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 OGDHQ02218 1023 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 ZNF846Q147U1 533 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 HERC3Q15034 1050 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 PGM5Q15124 567 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 TAZQ16635 292 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 SLC9A4Q6AI14 798 aa13.49□□□□□ -0.25
LETM1-203ENST00000505551 GADL1Q6ZQY3 521 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms