RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 ATP8B3O60423 1300 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 CCDC195A0A1B0GUA6 201 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 UBE2QL1A1L167 161 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 SMIM30A4D0T7 59 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 TBKBP1A7MCY6 615 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 A8MZ25 164 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 F5H697 171 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 TRIM13O60858 407 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 SOCS5O75159 536 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 BCAS2O75934 225 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 RECQL5O94762 991 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 CBX6O95503 412 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 C22orf31O95567 290 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 IFNB1P01574 187 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 ALDOAP04075 364 aaKnown RBP3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 CD8BP10966 210 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 PTPN2P17706 415 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 TFEBP19484 476 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 GSTM2P28161 218 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 TOB1P50616 345 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 RPS6KA3P51812 740 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 DGKQP52824 942 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 F2RL1P55085 397 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 ITGA1P56199 1179 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 NPRL3Q12980 569 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 TOP3AQ13472 1001 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 FHL3Q13643 280 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 BAATQ14032 418 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 IL11RAQ14626 422 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 LASP1Q14847 261 aaKnown RBP3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 ACOX1Q15067 660 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 TAZQ16635 292 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 LY6KQ17RY6 165 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 PROSER3Q2NL68 480 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 EDRF1Q3B7T1 1238 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 ANKRD20A4Q4UJ75 823 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 ANKRD20A8PQ5CZ79 823 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 ANKRD20A2Q5SQ80 823 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 ANKRD20A1Q5TYW2 823 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 MEX3CQ5U5Q3 659 aaKnown RBP3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 AGBL4Q5VU57 503 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 ANKRD20A3Q5VUR7 823 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 DRICH1Q6PGQ1 229 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 TMEM270Q6UE05 265 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 GBP6Q6ZN66 633 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 LINC00696Q6ZRV3 163 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 RGS9BPQ6ZS82 235 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 PPP1R42Q7Z4L9 355 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 RABEPKQ7Z6M1 372 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 ZER1Q7Z7L7 766 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 GPAT4Q86UL3 456 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 DZIP1Q86YF9 867 aaKnown RBP3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 CCDC13Q8IYE1 715 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 ANKRD35Q8N283 1001 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 METTL25Q8N6Q8 603 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 MB21D1Q8N884 522 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 FBXO30Q8TB52 745 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 OVCA2Q8WZ82 227 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 NPIPB3Q92617 1050 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 HES6Q96HZ4 224 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 LRIG1Q96JA1 1093 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 CFAP57Q96MR6 1250 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 ZNF558Q96NG5 402 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 CTAGE1Q96RT6 745 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 DCLRE1CQ96SD1 692 aaKnown RBP3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 MAP7D2Q96T17 732 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 PAAF1Q9BRP4 392 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 PCED1AQ9H1Q7 454 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 PLK3Q9H4B4 646 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 L2HGDHQ9H9P8 463 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 KIF9Q9HAQ2 790 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 USP29Q9HBJ7 922 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 MBNL1Q9NR56 388 aaKnown RBP3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 C20orf141Q9NUB4 165 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 CHCHD3Q9NX63 227 aaKnown RBP3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 KCTD5Q9NXV2 234 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 KLHL14Q9P2G3 628 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 OSGIN1Q9UJX0 560 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 SLC5A6Q9Y289 635 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 PCDHA5Q9Y5H7 936 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 SNX14Q9Y5W7 946 aa3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 COPG1Q9Y678 874 aaKnown RBP3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 EPN1Q9Y6I3 576 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P22-201ENST00000505315 SPAG9O60271 1321 aaKnown RBP3.77□□□□□ -1.81
HMGB1P22-201ENST00000505315 CNTNAP5Q8WYK1 1306 aa3.77□□□□□ -1.81
HMGB1P22-201ENST00000505315 OR14I1A6ND48 311 aa3.77□□□□□ -1.81
HMGB1P22-201ENST00000505315 ERICH4A6NGS2 130 aa3.77□□□□□ -1.81
HMGB1P22-201ENST00000505315 H3BQ06 376 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P22-201ENST00000505315 K7EPI3 171 aa3.77□□□□□ -1.81
HMGB1P22-201ENST00000505315 M0QZQ0 153 aa3.77□□□□□ -1.81
HMGB1P22-201ENST00000505315 QSOX1O00391 747 aa3.77□□□□□ -1.81
HMGB1P22-201ENST00000505315 PSMD14O00487 310 aa3.77□□□□□ -1.81
HMGB1P22-201ENST00000505315 ABLIM1O14639 778 aa3.77□□□□□ -1.81
HMGB1P22-201ENST00000505315 TRIM24O15164 1050 aa3.77□□□□□ -1.81
HMGB1P22-201ENST00000505315 ADAMDEC1O15204 470 aa3.77□□□□□ -1.81
HMGB1P22-201ENST00000505315 CA12O43570 354 aa3.77□□□□□ -1.81
HMGB1P22-201ENST00000505315 STRNO43815 780 aa3.77□□□□□ -1.81
HMGB1P22-201ENST00000505315 PAGE4O60829 102 aa3.77□□□□□ -1.81
HMGB1P22-201ENST00000505315 NDUFS3O75489 264 aa3.77□□□□□ -1.81
HMGB1P22-201ENST00000505315 SLC25A12O75746 678 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms