RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 TTC17Q96AE7 1141 aa9.35□□□□□ -0.91
DHFR-202ENST00000504396 FAM149B1Q96BN6 582 aa9.35□□□□□ -0.91
DHFR-202ENST00000504396 MRGPRX3Q96LB0 322 aa9.35□□□□□ -0.91
DHFR-202ENST00000504396 SERPINB11Q96P15 392 aa9.35□□□□□ -0.91
DHFR-202ENST00000504396 SCHIP1Q9P0W5 487 aaPredicted RBP9.35□□□□□ -0.91
DHFR-202ENST00000504396 TJP2Q9UDY2 1190 aa9.35□□□□□ -0.91
DHFR-202ENST00000504396 INTS6Q9UL03 887 aaKnown RBP9.35□□□□□ -0.91
DHFR-202ENST00000504396 HPSEQ9Y251 543 aa9.35□□□□□ -0.91
DHFR-202ENST00000504396 ITIH6Q6UXX5 1313 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 CAPN8A6NHC0 703 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 C10orf142B7Z368 130 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 O00370 1275 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 CETN3O15182 167 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 BNIP3LO60238 219 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 RTN2O75298 545 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 MT-CO3P00414 261 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 APOEP02649 317 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 MPOP05164 745 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 TBXAS1P24557 533 aaPredicted RBP9.34□□□□□ -0.91
DHFR-202ENST00000504396 NUDT1P36639 197 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 EPHA4P54764 986 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 PCBP4P57723 403 aaKnown RBP9.34□□□□□ -0.91
DHFR-202ENST00000504396 TMPRSS3P57727 454 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 ELAVL3Q14576 367 aaKnown RBP9.34□□□□□ -0.91
DHFR-202ENST00000504396 LBRQ14739 615 aaKnown RBP9.34□□□□□ -0.91
DHFR-202ENST00000504396 STILQ15468 1287 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 ACCSLQ4AC99 568 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 CBWD6Q4V339 395 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 MS4A13Q5J8X5 152 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 CBWD3Q5JTY5 395 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 TBCELQ5QJ74 424 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 CBWD5Q5RIA9 395 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 SFMBT2Q5VUG0 894 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 RAP1GAP2Q684P5 730 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 TMEM270Q6UE05 265 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 TMC6Q7Z403 805 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 DSG4Q86SJ6 1040 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 ERICH1Q86X53 443 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 MFSD2AQ8NA29 543 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 ZNF248Q8NDW4 579 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 MYEOVQ96EZ4 313 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 CCDC34Q96HJ3 373 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 ERVMER34-1Q9H9K5 563 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 ST7Q9NRC1 585 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 SLCO3A1Q9UIG8 710 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 CA5BQ9Y2D0 317 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 COQ4Q9Y3A0 265 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 PCDHB1Q9Y5F3 818 aa9.34□□□□□ -0.91
DHFR-202ENST00000504396 FAM237AA0A1B0GTK4 181 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 SIGLEC6O43699 453 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 FBXO21O94952 628 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 PAEPP09466 180 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 VAV1P15498 845 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 PDGFRAP16234 1089 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 ZNF18P17022 549 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 ACP1P24666 158 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 BRD2P25440 801 aaKnown RBP9.33□□□□□ -0.92
DHFR-202ENST00000504396 RXRGP48443 463 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 METAP1P53582 386 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 GABREP78334 506 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 E2F1Q01094 437 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 DPYDQ12882 1025 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 OVGP1Q12889 678 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 SETMARQ53H47 684 aaPredicted RBP9.33□□□□□ -0.92
DHFR-202ENST00000504396 DCAF6Q58WW2 860 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 PMF1Q6P1K2 205 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 SPATS2Q86XZ4 545 aaKnown RBP9.33□□□□□ -0.92
DHFR-202ENST00000504396 SMYD4Q8IYR2 804 aaPredicted RBP9.33□□□□□ -0.92
DHFR-202ENST00000504396 APCDD1Q8J025 514 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 DCBLD1Q8N8Z6 715 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 DQX1Q8TE96 717 aaKnown RBP9.33□□□□□ -0.92
DHFR-202ENST00000504396 KCNE4Q8WWG9 221 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 OR8D1Q8WZ84 308 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 KLHDC7BQ96G42 594 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 LMLNQ96KR4 655 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 FCRL2Q96LA5 508 aaPredicted RBP9.33□□□□□ -0.92
DHFR-202ENST00000504396 SPATA32Q96LK8 384 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 FAM129BQ96TA1 746 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 TSG101Q99816 390 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 TRIM62Q9BVG3 475 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 ABCG4Q9H172 646 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 CPNE5Q9HCH3 593 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 CYTH4Q9UIA0 394 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 TLR6Q9Y2C9 796 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 PCDHB4Q9Y5E5 795 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 ASXL3Q9C0F0 2248 aa9.33□□□□□ -0.92
DHFR-202ENST00000504396 C1QTNF3-AMACRE9PGA6 284 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 F5H5T6 163 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 PYCARD-AS1I3L0S3 204 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 TRIM38O00635 465 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 SLC16A3O15427 465 aaKnown RBP9.32□□□□□ -0.92
DHFR-202ENST00000504396 KLK10O43240 276 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 SART1O43290 800 aaKnown RBP9.32□□□□□ -0.92
DHFR-202ENST00000504396 USP12O75317 370 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 CELA2BP08218 269 aaPredicted RBP9.32□□□□□ -0.92
DHFR-202ENST00000504396 THEGLP0DJG4 465 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 NDUFA8P51970 172 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 UCNP55089 124 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 SLC12A1Q13621 1099 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 FAM46CQ5VWP2 391 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms