RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 S100A3P33764 101 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 XRCC4Q13426 336 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 ACOX1Q15067 660 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 ZACNQ401N2 412 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 USP45Q70EL2 814 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 YTHDF3Q7Z739 585 aaKnown RBP16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 DPP10Q8N608 796 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 ACMSDQ8TDX5 336 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 MYRFQ9Y2G1 1151 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 MRC1P22897 1456 aa16.77■□□□□ 0.27
PCDHA1-203ENST00000504120 OPLAHO14841 1288 aa16.77■□□□□ 0.27
PCDHA1-203ENST00000504120 SHBGP04278 402 aa16.77■□□□□ 0.27
PCDHA1-203ENST00000504120 ANXA6P08133 673 aa16.77■□□□□ 0.27
PCDHA1-203ENST00000504120 LBPP18428 481 aa16.77■□□□□ 0.27
PCDHA1-203ENST00000504120 GRK4P32298 578 aa16.77■□□□□ 0.27
PCDHA1-203ENST00000504120 HPCAL1P37235 193 aa16.77■□□□□ 0.27
PCDHA1-203ENST00000504120 SCNN1GP51170 649 aa16.77■□□□□ 0.27
PCDHA1-203ENST00000504120 NOMO3P69849 1222 aa16.77■□□□□ 0.27
PCDHA1-203ENST00000504120 GRIK3Q13003 919 aa16.77■□□□□ 0.27
PCDHA1-203ENST00000504120 GRIK5Q16478 980 aa16.77■□□□□ 0.27
PCDHA1-203ENST00000504120 FGD2Q7Z6J4 655 aa16.77■□□□□ 0.27
PCDHA1-203ENST00000504120 ZNF398Q8TD17 642 aa16.77■□□□□ 0.27
PCDHA1-203ENST00000504120 SNRNP27Q8WVK2 155 aaKnown RBP16.77■□□□□ 0.27
PCDHA1-203ENST00000504120 ERBB2P04626 1255 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 DUPD1Q68J44 220 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 IL27RAQ6UWB1 636 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 MSL3Q8N5Y2 521 aaKnown RBP16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 ITFG1Q8TB96 612 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 FAM45AQ8TCE6 357 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 TPRKBQ9Y3C4 175 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 CD3EAPO15446 510 aaKnown RBP16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 CLTBP09497 229 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 TALDO1P37837 337 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 CLCN5P51795 746 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 CRY1Q16526 586 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 RNF43Q68DV7 783 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 CASP12Q6UXS9 341 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 STK32CQ86UX6 486 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 RNF148Q8N7C7 305 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 RERGLQ9H628 205 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 SPATA31C2B4DYI2 1134 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 PSMD12O00232 456 aaPredicted RBP16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 MARSP56192 900 aaKnown RBP16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 CYP2R1Q6VVX0 501 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 C2orf49Q9BVC5 232 aaPredicted RBP16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 PTPRHQ9HD43 1115 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 ROBO3Q96MS0 1386 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 PSEN1P49768 467 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 ARCQ7LC44 396 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 DHRSXQ8N5I4 330 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 CEP44Q9C0F1 390 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 PDGFDQ9GZP0 370 aaPredicted RBP16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 GGA2Q9UJY4 613 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 hCG_1818297A0A087WSY0 165 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 FSCN2O14926 492 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 SNUPNO95149 360 aaKnown RBP16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 BCL10O95999 233 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 SPATA31C1P0DKV0 1188 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 PIK3R1P27986 724 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 ZC3H12AQ5D1E8 599 aaKnown RBP16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 HYIQ5T013 277 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 UNC5AQ6ZN44 842 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 PIGZQ86VD9 579 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 ARL15Q9NXU5 204 aa16.76■□□□□ 0.27
PCDHA1-203ENST00000504120 RCCD1A6NED2 376 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 TK2O00142 265 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 CALCAP01258 141 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 ATP5F1P24539 256 aaPredicted RBP16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 BEX3Q00994 111 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 ZNF513Q8N8E2 541 aaPredicted RBP16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 MYPNQ86TC9 1320 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 HS6ST1O60243 411 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 PSMG1O95456 288 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 ACSM2AQ08AH3 577 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 CYP2A13Q16696 494 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 PPM1LQ5SGD2 360 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 ACSM2BQ68CK6 577 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 IRGCQ6NXR0 463 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 ZDHHC13Q8IUH4 622 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 FUKQ8N0W3 1084 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 PRCCQ92733 491 aaPredicted RBP16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 MAML3Q96JK9 1138 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 RAD18Q9NS91 495 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 A0A0U1RQJ8 604 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 LRPAP1P30533 357 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 ELF3P78545 371 aaPredicted RBP16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 PAGE2BQ5JRK9 111 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 C16orf59Q7L2K0 433 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 EXOC3L1Q86VI1 746 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 SYT12Q8IV01 421 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 CERS5Q8N5B7 392 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 MAGEC3Q8TD91 643 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 ZNF184Q99676 751 aaPredicted RBP16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 ALG9Q9H6U8 611 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 RHBDL2Q9NX52 303 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 ARHGAP28Q9P2N2 729 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 SMIM10L2AP0DMW4 78 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 SMIM10L2BP0DMW5 78 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 MAPK8P45983 427 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 FAM187BQ17R55 369 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms