RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 FOSBP53539 338 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 EMP3P54852 163 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 TMEM132BQ14DG7 1078 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 DPYSL2Q16555 572 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 CCDC58Q4VC31 144 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 CRTC2Q53ET0 693 aaPredicted RBP2.84□□□□□ -1.96
NEDD4-204ENST00000503468 HABP4Q5JVS0 413 aaKnown RBP2.84□□□□□ -1.96
NEDD4-204ENST00000503468 SNRNP48Q6IEG0 339 aaKnown RBP2.84□□□□□ -1.96
NEDD4-204ENST00000503468 C4orf22Q6V702 233 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 NT5DC3Q86UY8 548 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 SLC13A5Q86YT5 568 aaPredicted RBP2.84□□□□□ -1.96
NEDD4-204ENST00000503468 SFRP1Q8N474 314 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 LZTR1Q8N653 840 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 USHBP1Q8N6Y0 703 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 SNX31Q8N9S9 440 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 VPS37AQ8NEZ2 397 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 TSPAN14Q8NG11 270 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 MDM1Q8TC05 714 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 EDC3Q96F86 508 aaKnown RBP2.84□□□□□ -1.96
NEDD4-204ENST00000503468 PLEKHA8Q96JA3 519 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 TSSK1BQ9BXA7 367 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 SENP6Q9GZR1 1112 aaPredicted RBP2.84□□□□□ -1.96
NEDD4-204ENST00000503468 PIDD1Q9HB75 910 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 SELENONQ9NZV5 590 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 BIN2Q9UBW5 565 aaPredicted RBP2.84□□□□□ -1.96
NEDD4-204ENST00000503468 NIP7Q9Y221 180 aaKnown RBP eCLIP2.84□□□□□ -1.96
NEDD4-204ENST00000503468 ARHGAP42A6NI28 874 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 TNFRSF10AO00220 468 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 ANGPT2O15123 496 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 EPHB6O15197 1021 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 MAP3K13O43283 966 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 ARHGEF9O43307 516 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 KRT36O76013 467 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 H6PDO95479 791 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 HMGCRP04035 888 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 THBS1P07996 1170 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 CYC1P08574 325 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 OR52Z1P0C646 297 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 MCF2P10911 925 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 TNFAIP3P21580 790 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 CXCR5P32302 372 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 ALDH3B2P48448 385 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 MAPKAPK2P49137 400 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 CCL7P80098 99 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 NFKB2Q00653 900 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 CACNB1Q02641 598 aaPredicted RBP2.84□□□□□ -1.96
NEDD4-204ENST00000503468 CHRNEQ04844 493 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 GRSF1Q12849 480 aaKnown RBP eCLIP2.84□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF846Q147U1 533 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 AOC3Q16853 763 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 ADPRMQ3LIE5 342 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 CAMKMTQ7Z624 323 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 KIAA2013Q8IYS2 634 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 SPARTQ8N0X7 666 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 CARFQ8N187 725 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 MCPH1Q8NEM0 835 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 CHTF18Q8WVB6 975 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 UTP4Q969X6 686 aaKnown RBP2.84□□□□□ -1.96
NEDD4-204ENST00000503468 APOPT1Q96IL0 206 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 MYLK2Q9H1R3 596 aa2.84□□□□□ -1.96
NEDD4-204ENST00000503468 CCDC177Q9NQR7 707 aaPredicted RBP2.84□□□□□ -1.96
NEDD4-204ENST00000503468 SRP68Q9UHB9 627 aaKnown RBP2.84□□□□□ -1.96
NEDD4-204ENST00000503468 WBP11Q9Y2W2 641 aaKnown RBP2.84□□□□□ -1.96
NEDD4-204ENST00000503468 MAGEB16A2A368 324 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 BACH1O14867 736 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 GPR32O75388 356 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 DAB1O75553 588 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 BMP10O95393 424 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 BCL10O95999 233 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 S100BP04271 92 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 SHBGP04278 402 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 ITPKAP23677 461 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 CTHP32929 405 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 SERPINB9P50453 376 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 PRKAA2P54646 552 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 VCPP55072 806 aaKnown RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 RAB25P57735 213 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 IFI35P80217 286 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 GK3PQ14409 553 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 LRRC36Q1X8D7 754 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 TMEM95Q3KNT9 176 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 SETMARQ53H47 684 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 VSTM1Q6UX27 236 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 GSTA5Q7RTV2 222 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 PRUNE1Q86TP1 453 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 CCDC25Q86WR0 208 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 SLC15A3Q8IY34 581 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 PDZD8Q8NEN9 1154 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 LILRB1Q8NHL6 650 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 GSDMBQ8TAX9 411 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 PPP4R1Q8TF05 950 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 PRCCQ92733 491 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 ART4Q93070 314 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 APBA2Q99767 749 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 MROQ9BYG7 248 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 GBA2Q9HCG7 927 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 C6orf50Q9HD87 102 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 HEY2Q9UBP5 337 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 IP6K2Q9UHH9 426 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 ANAPC5Q9UJX4 755 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms