RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 CLCN5P51795 746 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 SP3Q02447 781 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 ITGA7Q13683 1181 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 VEPH1Q14D04 833 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 TAF5Q15542 800 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 TEDDM1Q5T9Z0 273 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 MRNIPQ6NTE8 343 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 ECHDC2Q86YB7 292 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 BTN2A3PQ96KV6 586 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 PWWP2AQ96N64 755 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 C1orf21Q9H246 121 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 SIRPGQ9P1W8 387 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 GJD2Q9UKL4 321 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 TLR6Q9Y2C9 796 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 HBS1LQ9Y450 684 aaKnown RBP7.53□□□□□ -1.2
PDGFC-203ENST00000502773 ZSWIM8A7E2V4 1837 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 GOLGA8RI6L899 631 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 DFFAO00273 331 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 IRAK2O43187 625 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 MFSD11O43934 449 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 JCHAINP01591 159 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 CTSHP09668 335 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 FGFR1P11362 822 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 ACAT1P24752 427 aaKnown RBP7.53□□□□□ -1.2
PDGFC-203ENST00000502773 FOXN2P32314 431 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 PGM1P36871 562 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 SLC1A6P48664 564 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 USP10Q14694 798 aaKnown RBP7.53□□□□□ -1.2
PDGFC-203ENST00000502773 ANKRD20A4Q4UJ75 823 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 MARC1Q5VT66 337 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 PKN3Q6P5Z2 889 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 CXCL17Q6UXB2 119 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 OSTM1Q86WC4 334 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 ZNF567Q8N184 647 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 GFM2Q969S9 779 aaKnown RBP7.53□□□□□ -1.2
PDGFC-203ENST00000502773 RBBP8Q99708 897 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 ZYG11BQ9C0D3 744 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 GLOD4Q9HC38 313 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 ZC4H2Q9NQZ6 224 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 RGS18Q9NS28 235 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 TMEM161AQ9NX61 479 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 ARHGEF38Q9NXL2 777 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 L3MBTL1Q9Y468 752 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 LRRC37A2A6NM11 1700 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 PLXNB2O15031 1838 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 POLR2AP24928 1970 aaKnown RBP7.53□□□□□ -1.2
PDGFC-203ENST00000502773 SH3BP5O60239 455 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 SBF1O95248 1867 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 BGNP21810 368 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 CLCNKBP51801 687 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 ITKQ08881 620 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 PLD1Q13393 1074 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 CA9Q16790 459 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 MSANTD2Q6P1R3 559 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 MTDHQ86UE4 582 aaKnown RBP7.53□□□□□ -1.2
PDGFC-203ENST00000502773 FITM2Q8N6M3 262 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 ZNF557Q8N988 423 aaPredicted RBP7.53□□□□□ -1.2
PDGFC-203ENST00000502773 DQX1Q8TE96 717 aaKnown RBP7.53□□□□□ -1.2
PDGFC-203ENST00000502773 PXYLP1Q8TE99 480 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 KHSRPQ92945 711 aaKnown RBP eCLIP7.53□□□□□ -1.2
PDGFC-203ENST00000502773 NCKIPSDQ9NZQ3 722 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 UXTQ9UBK9 157 aaPredicted RBP7.53□□□□□ -1.2
PDGFC-203ENST00000502773 BLOC1S6Q9UL45 172 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 TLL2Q9Y6L7 1015 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 PTGESO14684 152 aa7.52□□□□□ -1.2
PDGFC-203ENST00000502773 ACADSP16219 412 aa7.52□□□□□ -1.2
PDGFC-203ENST00000502773 NAT1P18440 290 aa7.52□□□□□ -1.2
PDGFC-203ENST00000502773 BDNFP23560 247 aa7.52□□□□□ -1.2
PDGFC-203ENST00000502773 SERPINB3P29508 390 aa7.52□□□□□ -1.2
PDGFC-203ENST00000502773 CD151P48509 253 aa7.52□□□□□ -1.2
PDGFC-203ENST00000502773 HARS2P49590 506 aaKnown RBP7.52□□□□□ -1.2
PDGFC-203ENST00000502773 TUBP50607 506 aa7.52□□□□□ -1.2
PDGFC-203ENST00000502773 FOXD4Q12950 439 aaPredicted RBP7.52□□□□□ -1.2
PDGFC-203ENST00000502773 HIC1Q14526 733 aa7.52□□□□□ -1.2
PDGFC-203ENST00000502773 ZNF235Q14590 738 aa7.52□□□□□ -1.2
PDGFC-203ENST00000502773 RFTN1Q14699 578 aaPredicted RBP7.52□□□□□ -1.2
PDGFC-203ENST00000502773 CTXN3Q4LDR2 81 aa7.52□□□□□ -1.2
PDGFC-203ENST00000502773 AARS2Q5JTZ9 985 aaKnown RBP7.52□□□□□ -1.2
PDGFC-203ENST00000502773 N4BP2L1Q5TBK1 243 aaPredicted RBP7.52□□□□□ -1.2
PDGFC-203ENST00000502773 AAGABQ6PD74 315 aa7.52□□□□□ -1.2
PDGFC-203ENST00000502773 CLNKQ7Z7G1 428 aa7.52□□□□□ -1.2
PDGFC-203ENST00000502773 ARID3BQ8IVW6 561 aaPredicted RBP7.52□□□□□ -1.2
PDGFC-203ENST00000502773 RTL3Q8N8U3 475 aaKnown RBP7.52□□□□□ -1.2
PDGFC-203ENST00000502773 RIN3Q8TB24 985 aa7.52□□□□□ -1.2
PDGFC-203ENST00000502773 RANBP9Q96S59 729 aa7.52□□□□□ -1.2
PDGFC-203ENST00000502773 CCDC28BQ9BUN5 200 aa7.52□□□□□ -1.2
PDGFC-203ENST00000502773 SIK2Q9H0K1 926 aa7.52□□□□□ -1.2
PDGFC-203ENST00000502773 SLC25A51Q9H1U9 297 aa7.52□□□□□ -1.2
PDGFC-203ENST00000502773 SYTL2Q9HCH5 934 aa7.52□□□□□ -1.2
PDGFC-203ENST00000502773 DNAAF2Q9NVR5 837 aaKnown RBP7.52□□□□□ -1.2
PDGFC-203ENST00000502773 RIMKLBQ9ULI2 386 aa7.52□□□□□ -1.2
PDGFC-203ENST00000502773 USP3Q9Y6I4 520 aa7.52□□□□□ -1.2
PDGFC-203ENST00000502773 PABPN1LA6NDY0 278 aaKnown RBP7.52□□□□□ -1.21
PDGFC-203ENST00000502773 CASTOR2A6NHX0 329 aa7.52□□□□□ -1.21
PDGFC-203ENST00000502773 MAP3K7O43318 606 aa7.52□□□□□ -1.21
PDGFC-203ENST00000502773 ATP9BO43861 1147 aa7.52□□□□□ -1.21
PDGFC-203ENST00000502773 GPC4O75487 556 aa7.52□□□□□ -1.21
PDGFC-203ENST00000502773 OAZ2O95190 189 aa7.52□□□□□ -1.21
PDGFC-203ENST00000502773 METTL18O95568 372 aa7.52□□□□□ -1.21
PDGFC-203ENST00000502773 ASGR1P07306 291 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms