RNA–Protein interactions for RNA: ENST00000502669.5

SH3TC1-206, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 3,484 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-206ENST00000502669 RBM22Q9NW64 420 aaKnown RBP eCLIP15.27■□□□□ 0.044e-7■■■□□ 15.9
SH3TC1-206ENST00000502669 MPP6Q9NZW5 540 aa15.27■□□□□ 0.04
SH3TC1-206ENST00000502669 FBXW11Q9UKB1 542 aa15.27■□□□□ 0.04
SH3TC1-206ENST00000502669 RGPD3A6NKT7 1758 aaPredicted RBP15.27■□□□□ 0.04
SH3TC1-206ENST00000502669 RGPD4Q7Z3J3 1758 aa15.27■□□□□ 0.04
SH3TC1-206ENST00000502669 CNGA3Q16281 694 aa15.27■□□□□ 0.04
SH3TC1-206ENST00000502669 MMEL1Q495T6 779 aa15.27■□□□□ 0.04
SH3TC1-206ENST00000502669 TMEM198Q66K66 360 aa15.27■□□□□ 0.04
SH3TC1-206ENST00000502669 STEAP4Q687X5 459 aa15.27■□□□□ 0.04
SH3TC1-206ENST00000502669 SEL1L3Q68CR1 1132 aa15.27■□□□□ 0.04
SH3TC1-206ENST00000502669 SMARCD1Q96GM5 515 aa15.27■□□□□ 0.04
SH3TC1-206ENST00000502669 LENG8Q96PV6 779 aaPredicted RBP15.27■□□□□ 0.04
SH3TC1-206ENST00000502669 FTHL17Q9BXU8 183 aa15.27■□□□□ 0.04
SH3TC1-206ENST00000502669 DCLK1O15075 740 aa15.27■□□□□ 0.03
SH3TC1-206ENST00000502669 HMBSP08397 361 aa15.27■□□□□ 0.03
SH3TC1-206ENST00000502669 COX4I1P13073 169 aa15.27■□□□□ 0.03
SH3TC1-206ENST00000502669 RAG1P15918 1043 aa15.27■□□□□ 0.03
SH3TC1-206ENST00000502669 ACTR3P61158 418 aa15.27■□□□□ 0.03
SH3TC1-206ENST00000502669 GRB14Q14449 540 aa15.27■□□□□ 0.03
SH3TC1-206ENST00000502669 OTUD1Q5VV17 481 aaPredicted RBP15.27■□□□□ 0.03
SH3TC1-206ENST00000502669 ZNF470Q6ECI4 717 aa15.27■□□□□ 0.03
SH3TC1-206ENST00000502669 IRGCQ6NXR0 463 aa15.27■□□□□ 0.03
SH3TC1-206ENST00000502669 TMC7Q7Z402 723 aa15.27■□□□□ 0.03
SH3TC1-206ENST00000502669 NDNQ99608 321 aa15.27■□□□□ 0.03
SH3TC1-206ENST00000502669 SGIP1Q9BQI5 828 aa15.27■□□□□ 0.03
SH3TC1-206ENST00000502669 KATNBL1Q9H079 304 aa15.27■□□□□ 0.03
SH3TC1-206ENST00000502669 CNGB3Q9NQW8 809 aa15.27■□□□□ 0.03
SH3TC1-206ENST00000502669 NCAM2O15394 837 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 MTSS1O43312 755 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 ALDH1A2O94788 518 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 F9P00740 461 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 KCNE1P15382 129 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 COG7P83436 770 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 DPYSQ14117 519 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 CSHL1Q14406 222 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 PAFAH1B3Q15102 231 aaKnown RBP15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 ALKAL1Q6UXT8 129 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 KBTBD2Q8IY47 623 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 MLPHQ9BV36 600 aaPredicted RBP15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 IL22Q9GZX6 179 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 CDH19Q9H159 772 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 GBA3Q9H227 469 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 EIF2B3Q9NR50 452 aaKnown RBP15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 ABI2Q9NYB9 513 aaPredicted RBP15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 ADA2Q9NZK5 511 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 XPR1Q9UBH6 696 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 ACOT9Q9Y305 439 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 ZNF487B1APH4 448 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 ARRB2P32121 409 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 THPOP40225 353 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 CHRNA4P43681 627 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 ANO4Q32M45 955 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 ARL13AQ5H913 290 aaPredicted RBP15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 PPM1LQ5SGD2 360 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 LDLRAD1Q5T700 205 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 ESRP1Q6NXG1 681 aaKnown RBP15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 PPHLN1Q8NEY8 458 aaKnown RBP15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 ZC3H15Q8WU90 426 aaKnown RBP15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 TMEM30AQ9NV96 361 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 MKS1Q9NXB0 559 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 MIOSQ9NXC5 875 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 ETAA1Q9NY74 926 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 MID2Q9UJV3 735 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 PDE4DIPQ5VU43 2346 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 CCL22O00626 93 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 TNPO2O14787 897 aaKnown RBP15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 GPC4O75487 556 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 FYNP06241 537 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 OR4Q2P0C623 313 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 SCNN1AP37088 669 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 ETFBP38117 255 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 CCNG1P51959 295 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 RAP1GDS1P52306 607 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 MAXP61244 160 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 KLF10Q13118 480 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 TIGD5Q53EQ6 642 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 NOMO2Q5JPE7 1267 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 MAPK15Q8TD08 544 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 SORT1Q99523 831 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 CDH22Q9UJ99 828 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 TRHDEQ9UKU6 1024 aa15.26■□□□□ 0.03
SH3TC1-206ENST00000502669 RBM47A0AV96 593 aaKnown RBP15.25■□□□□ 0.03
SH3TC1-206ENST00000502669 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.25■□□□□ 0.03
SH3TC1-206ENST00000502669 I6L893 689 aaPredicted RBP15.25■□□□□ 0.03
SH3TC1-206ENST00000502669 MPOP05164 745 aa15.25■□□□□ 0.03
SH3TC1-206ENST00000502669 HNRNPLP14866 589 aaKnown RBP eCLIP15.25■□□□□ 0.034e-7■■■■□ 19.4
SH3TC1-206ENST00000502669 SP100P23497 879 aaPredicted RBP15.25■□□□□ 0.03
SH3TC1-206ENST00000502669 CD68P34810 354 aaPredicted RBP15.25■□□□□ 0.03
SH3TC1-206ENST00000502669 NAB1Q13506 487 aa15.25■□□□□ 0.03
SH3TC1-206ENST00000502669 LAYNQ6UX15 382 aa15.25■□□□□ 0.03
SH3TC1-206ENST00000502669 C3orf58Q8NDZ4 430 aa15.25■□□□□ 0.03
SH3TC1-206ENST00000502669 PHF21BQ96EK2 531 aa15.25■□□□□ 0.03
SH3TC1-206ENST00000502669 CDRT15Q96T59 188 aa15.25■□□□□ 0.03
SH3TC1-206ENST00000502669 A0A088AWK7 358 aa15.25■□□□□ 0.03
SH3TC1-206ENST00000502669 LINGO3P0C6S8 592 aa15.25■□□□□ 0.03
SH3TC1-206ENST00000502669 STMN1P16949 149 aa15.25■□□□□ 0.03
SH3TC1-206ENST00000502669 TSPAN8P19075 237 aa15.25■□□□□ 0.03
SH3TC1-206ENST00000502669 NPY2RP49146 381 aa15.25■□□□□ 0.03
SH3TC1-206ENST00000502669 PPIDQ08752 370 aaKnown RBP15.25■□□□□ 0.03
SH3TC1-206ENST00000502669 FAM110CQ1W6H9 321 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms