RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 SUN1O94901 812 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 CXCL14O95715 111 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 OLFM2O95897 454 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 RHOCP08134 193 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 INHBAP08476 426 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 OR1E1P30953 314 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 BMPR1AP36894 532 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 MDH1P40925 334 aaKnown RBP8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 GRIA1P42261 906 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 MSH2P43246 934 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 MMP13P45452 471 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 CDH4P55283 916 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 YBEYP58557 167 aaPredicted RBP8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 CRADDP78560 199 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 SMAD3P84022 425 aaKnown RBP8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 PPARDQ03181 441 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 UBE3AQ05086 875 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 OLIG2Q13516 323 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 SPARCL1Q14515 664 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 CRYMQ14894 314 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 POLD3Q15054 466 aaPredicted RBP8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 TUBB8Q3ZCM7 444 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 KBTBD12Q3ZCT8 623 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 PABPC1LQ4VXU2 614 aaKnown RBP8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 TNFAIP8L3Q5GJ75 292 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 PPM1LQ5SGD2 360 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 TMCO4Q5TGY1 634 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 KCTD11Q693B1 232 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 C3orf62Q6ZUJ4 267 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 CHST9Q7L1S5 443 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 TMEM150AQ86TG1 271 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 LINC00523Q86TU6 105 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 CTAGE3PQ8IX95 158 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 CFAP52Q8N1V2 620 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 DNAAF3Q8N9W5 541 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 HJURPQ8NCD3 748 aaPredicted RBP8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 IPMKQ8NFU5 416 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 OR52K1Q8NGK4 314 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 POF1BQ8WVV4 589 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 ZNF669Q96BR6 464 aaPredicted RBP8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 MYEOVQ96EZ4 313 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 OXNAD1Q96HP4 312 aaPredicted RBP8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 ZNF419Q96HQ0 510 aaPredicted RBP8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 SIGLEC10Q96LC7 697 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 FCRL5Q96RD9 977 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 TBL1YQ9BQ87 522 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 C17orf80Q9BSJ5 609 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 NAT9Q9BTE0 207 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 FICDQ9BVA6 458 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 KLF16Q9BXK1 252 aaPredicted RBP8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 FSD1LQ9BXM9 530 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 GLOD4Q9HC38 313 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 ALG13Q9NP73 1137 aaKnown RBP8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 NT5MQ9NPB1 228 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 CASS4Q9NQ75 786 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 MAN1C1Q9NR34 630 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 HAUS2Q9NVX0 235 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 RBM22Q9NW64 420 aaKnown RBP eCLIP8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 SENP1Q9P0U3 644 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 ZNF212Q9UDV6 495 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 ACTL7BQ9Y614 415 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 CPQQ9Y646 472 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 MKI67P46013 3256 aaKnown RBP8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 ANKRD12Q6UB98 2062 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 TRAV19A0A0A6YYK7 116 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 IQANK1A0A1B0GTG1 560 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 TMEM120BA0PK00 339 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 C2orf71A6NGG8 1288 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 SDR42E2A6NKP2 422 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 DRGXA6NNA5 263 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 HIDE1A8MVS5 230 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 AP3B1O00203 1094 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 TRDMT1O14717 391 aaKnown RBP8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 CLDN11O75508 207 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 F11P03951 625 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 MYL4P12829 197 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 BRAFP15056 766 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 CHN1P15882 459 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 PRKCHP24723 683 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 GBP2P32456 591 aaPredicted RBP8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 LSP1P33241 339 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 ACVRL1P37023 503 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 IFNAR2P48551 515 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 SGSHP51688 502 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 ERVFC1P60507 584 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 RPS24P62847 133 aaKnown RBP8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 IL10RBQ08334 325 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 CDH17Q12864 832 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 NAB1Q13506 487 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 SERINC3Q13530 473 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 RASA2Q15283 850 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 C5orf22Q49AR2 442 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 SPANXN3Q5MJ09 141 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 EMC10Q5UCC4 262 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 MARK2Q7KZI7 788 aaKnown RBP8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 OTOP3Q7RTS5 596 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 TRABD2AQ86V40 505 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 EXOC3L1Q86VI1 746 aa8.22□□□□□ -1.09
PDZRN3-212ENST00000498048 CCNJLQ8IV13 435 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms