RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 TBC1D14Q9P2M4 693 aa14.5□□□□□ -0.09
VPS26A-209ENST00000497564 TPX2Q9ULW0 747 aaKnown RBP14.5□□□□□ -0.09
VPS26A-209ENST00000497564 SHOC2Q9UQ13 582 aa14.5□□□□□ -0.09
VPS26A-209ENST00000497564 FARP1Q9Y4F1 1045 aaPredicted RBP14.5□□□□□ -0.09
VPS26A-209ENST00000497564 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.49□□□□□ -0.09
VPS26A-209ENST00000497564 ILVBLA1L0T0 632 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 RNF103O00237 685 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 MATN3O15232 486 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 PI15O43692 258 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 PTPN3P26045 913 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 AVPR2P30518 371 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 VPS41P49754 854 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 ITGA8P53708 1063 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 PLTPP55058 493 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 ZNF177Q13360 481 aaPredicted RBP14.49□□□□□ -0.09
VPS26A-209ENST00000497564 SERINC3Q13530 473 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 GRM2Q14416 872 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 POLD3Q15054 466 aaPredicted RBP14.49□□□□□ -0.09
VPS26A-209ENST00000497564 KCTD19Q17RG1 926 aaPredicted RBP14.49□□□□□ -0.09
VPS26A-209ENST00000497564 MPPE1Q53F39 396 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 ANKRD20A2Q5SQ80 823 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 RNASEH2BQ5TBB1 312 aaKnown RBP14.49□□□□□ -0.09
VPS26A-209ENST00000497564 ANKRD20A1Q5TYW2 823 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 ANKRD20A3Q5VUR7 823 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 MTSS1LQ765P7 747 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 ARID3BQ8IVW6 561 aaPredicted RBP14.49□□□□□ -0.09
VPS26A-209ENST00000497564 GSPT2Q8IYD1 628 aaKnown RBP14.49□□□□□ -0.09
VPS26A-209ENST00000497564 CELF5Q8N6W0 485 aaKnown RBP14.49□□□□□ -0.09
VPS26A-209ENST00000497564 PRSS33Q8NF86 280 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 FLCNQ8NFG4 579 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 RIN3Q8TB24 985 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 ZSCAN18Q8TBC5 510 aaPredicted RBP14.49□□□□□ -0.09
VPS26A-209ENST00000497564 FBXO25Q8TCJ0 367 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 LRRN4Q8WUT4 740 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 MAML1Q92585 1016 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 TMA16Q96EY4 203 aaKnown RBP14.49□□□□□ -0.09
VPS26A-209ENST00000497564 HMCESQ96FZ2 354 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 FMO2Q99518 471 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 IL12RB2Q99665 862 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 ARFGAP3Q9NP61 516 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 SLC2A4RGQ9NR83 387 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 OBP2AQ9NY56 170 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 MTRF1LQ9UGC7 380 aaKnown RBP14.49□□□□□ -0.09
VPS26A-209ENST00000497564 TRHDEQ9UKU6 1024 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 F5P12259 2224 aa14.49□□□□□ -0.09
VPS26A-209ENST00000497564 USP34Q70CQ2 3546 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 TRDMT1O14717 391 aaKnown RBP14.48□□□□□ -0.09
VPS26A-209ENST00000497564 SLC9A3R1O14745 358 aaPredicted RBP14.48□□□□□ -0.09
VPS26A-209ENST00000497564 TSPAN3O60637 253 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 TBL1XO60907 577 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 ECI2O75521 394 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 LUC7L3O95232 432 aaKnown RBP14.48□□□□□ -0.09
VPS26A-209ENST00000497564 FDFT1P37268 417 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 ETFBP38117 255 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 NRLP54845 237 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 GNA12Q03113 381 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 TNK2Q07912 1038 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 IL10RBQ08334 325 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 ANO4Q32M45 955 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 TEX44Q53QW1 395 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 CXorf57Q6NSI4 855 aaKnown RBP14.48□□□□□ -0.09
VPS26A-209ENST00000497564 ARHGAP36Q6ZRI8 547 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 ARHGEF18Q6ZSZ5 1173 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 PPIL6Q8IXY8 311 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 ZNF567Q8N184 647 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 CCDC110Q8TBZ0 833 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 CPT1BQ92523 772 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 SMARCD2Q92925 531 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 ARHGEF2Q92974 986 aaKnown RBP14.48□□□□□ -0.09
VPS26A-209ENST00000497564 PHACTR1Q9C0D0 580 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 TSPYL1Q9H0U9 437 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 MFSD1Q9H3U5 465 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 WNT16Q9UBV4 365 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 IPO11Q9UI26 975 aaKnown RBP14.48□□□□□ -0.09
VPS26A-209ENST00000497564 ANAPC5Q9UJX4 755 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 PIEZO1Q92508 2521 aa14.48□□□□□ -0.09
VPS26A-209ENST00000497564 KCNK1O00180 336 aa14.47□□□□□ -0.09
VPS26A-209ENST00000497564 CHADO15335 359 aa14.47□□□□□ -0.09
VPS26A-209ENST00000497564 PEX11BO96011 259 aa14.47□□□□□ -0.09
VPS26A-209ENST00000497564 RHOCP08134 193 aa14.47□□□□□ -0.09
VPS26A-209ENST00000497564 IFNAR2P48551 515 aa14.47□□□□□ -0.09
VPS26A-209ENST00000497564 CBLBQ13191 982 aa14.47□□□□□ -0.09
VPS26A-209ENST00000497564 SEMA5AQ13591 1074 aa14.47□□□□□ -0.09
VPS26A-209ENST00000497564 HNRNPDQ14103 355 aaKnown RBP14.47□□□□□ -0.09
VPS26A-209ENST00000497564 KCNJ11Q14654 390 aa14.47□□□□□ -0.09
VPS26A-209ENST00000497564 ASTLQ6HA08 431 aaPredicted RBP14.47□□□□□ -0.09
VPS26A-209ENST00000497564 VITQ6UXI7 678 aa14.47□□□□□ -0.09
VPS26A-209ENST00000497564 CEP128Q6ZU80 1094 aa14.47□□□□□ -0.09
VPS26A-209ENST00000497564 KLHDC8BQ8IXV7 354 aa14.47□□□□□ -0.09
VPS26A-209ENST00000497564 MREGQ8N565 214 aa14.47□□□□□ -0.09
VPS26A-209ENST00000497564 NAT8LQ8N9F0 302 aa14.47□□□□□ -0.09
VPS26A-209ENST00000497564 DEPDC1BQ8WUY9 529 aa14.47□□□□□ -0.09
VPS26A-209ENST00000497564 PRCCQ92733 491 aaPredicted RBP14.47□□□□□ -0.09
VPS26A-209ENST00000497564 ELSPBP1Q96BH3 223 aa14.47□□□□□ -0.09
VPS26A-209ENST00000497564 TEKT5Q96M29 485 aa14.47□□□□□ -0.09
VPS26A-209ENST00000497564 ZNF599Q96NL3 588 aa14.47□□□□□ -0.09
VPS26A-209ENST00000497564 LRRC3BQ96PB8 259 aa14.47□□□□□ -0.09
VPS26A-209ENST00000497564 ACE2Q9BYF1 805 aaPredicted RBP14.47□□□□□ -0.09
VPS26A-209ENST00000497564 ARHGEF3Q9NR81 526 aa14.47□□□□□ -0.09
VPS26A-209ENST00000497564 MARK1Q9P0L2 795 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms