RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 TLK1Q9UKI8 766 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 RUVBL1Q9Y265 456 aaKnown RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 NFE2L3Q9Y4A8 694 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 PIAS3Q9Y6X2 628 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 PTPRTO14522 1441 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 PLEKHH1Q9ULM0 1364 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 MAPKBP1O60336 1514 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 UBN2Q6ZU65 1347 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 A0A0J9YVX5 310 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 TCRBV5S2A0A599 114 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 PCP4L1A6NKN8 68 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 CENPBD1B2RD01 187 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 PSMD11O00231 422 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 HNRNPRO43390 633 aaKnown RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 NDUFA2O43678 99 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 GPC4O75487 556 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 ANXA6P08133 673 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 JMJD7P0C870 316 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 SRGAP2BP0DMP2 458 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 GJA1P17302 382 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 TNFSF4P23510 183 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 PTBP1P26599 531 aaKnown RBP eCLIP3.18□□□□□ -1.93e-6■■■■■ 31
SNRNP48-202ENST00000496946 MC4RP32245 332 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 CCR1P32246 355 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 CIITAP33076 1130 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 WNT5AP41221 380 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 CASP5P51878 434 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 COPB1P53618 953 aaKnown RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC12A3P55017 1021 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 NR1H2P55055 460 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 HTRA3P83110 453 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 EFR3AQ14156 821 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 PON2Q15165 354 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 DHCR24Q15392 516 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 CYTH1Q15438 398 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 SURF1Q15526 300 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 ARHGAP44Q17R89 818 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 RGS21Q2M5E4 152 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 PARP6Q2NL67 630 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 SPATS1Q496A3 300 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 FAM76BQ5HYJ3 339 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 C6orf163Q5TEZ5 329 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 CIAPIN1Q6FI81 312 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF425Q6IV72 752 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 STYK1Q6J9G0 422 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 FOXR2Q6PJQ5 311 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 C4orf22Q6V702 233 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 R3HCC1LQ7Z5L2 792 aaKnown RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 ASPGQ86U10 573 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 AHI1Q8N157 1196 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 C17orf53Q8N3J3 647 aaPredicted RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 TBC1D19Q8N5T2 526 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 TP53I13Q8NBR0 393 aaPredicted RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 STKLD1Q8NE28 680 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 CFAP61Q8NHU2 1237 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 SCFD2Q8WU76 684 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 LRRC59Q96AG4 307 aaKnown RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 DACT3Q96B18 629 aaPredicted RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF274Q96GC6 653 aaPredicted RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 AIFM3Q96NN9 605 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 OPALINQ96PE5 141 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 VPS35Q96QK1 796 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 PKP4Q99569 1192 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC29A1Q99808 456 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 NFKBIZQ9BYH8 718 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF341Q9BYN7 854 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 RNF38Q9H0F5 515 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 C1orf21Q9H246 121 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 VCXQ9H320 206 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 FAM204AQ9H8W3 233 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 TRIM45Q9H8W5 580 aaPredicted RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 SP140LQ9H930 580 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 KCNK13Q9HB14 408 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC40A1Q9NP59 571 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 INTS9Q9NV88 658 aaKnown RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 DTLQ9NZJ0 730 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 GRHPRQ9UBQ7 328 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 AFF4Q9UHB7 1163 aaKnown RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 MAGEL2Q9UJ55 1249 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 PCDHGB2Q9Y5G2 931 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 SMCO2A6NFE2 343 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 ZSCAN5BA6NJL1 495 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 MIF4GDA9UHW6 222 aaKnown RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF879B4DU55 563 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 PCDH17O14917 1159 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 SCAMP1O15126 338 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 FMO6PO60774 539 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 CDC123O75794 336 aaPredicted RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 RBBP9O75884 186 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 KRT37O76014 449 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 ZBED1O96006 694 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 ASS1P00966 412 aaKnown RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 AMY2AP04746 511 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 PFKMP08237 780 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 ITGA2P17301 1181 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 AMY2BP19961 511 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 PPP2R1AP30153 589 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 ADSLP30566 484 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms