RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 KLHL33A6NCF5 533 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 GFRA2O00451 464 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 FDFT1P37268 417 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 MAGEA9P43362 315 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 ARL4CP56559 192 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 YBEYP58557 167 aaPredicted RBP17.22■□□□□ 0.35
LMNA-216ENST00000496738 IFI35P80217 286 aaPredicted RBP17.22■□□□□ 0.35
LMNA-216ENST00000496738 KYNUQ16719 465 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 PARP6Q2NL67 630 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 BBS9Q3SYG4 887 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 TTC39BQ5VTQ0 682 aaPredicted RBP17.22■□□□□ 0.35
LMNA-216ENST00000496738 SYCE2Q6PIF2 218 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 EXOC4Q96A65 974 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 GBA3Q9H227 469 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 CLEC4EQ9ULY5 219 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 ZNF510Q9Y2H8 683 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 E2F8A0AVK6 867 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 GOLGA6BA6NDN3 693 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 NDC80O14777 642 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 LUC7L3O95232 432 aaKnown RBP17.22■□□□□ 0.35
LMNA-216ENST00000496738 FSHRP23945 695 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 ZNF33AQ06730 810 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 CDH18Q13634 790 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 ZNF77Q15935 545 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 CENPUQ71F23 418 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 EFHBQ8N7U6 833 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 SERPINB12Q96P63 405 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 VAT1Q99536 393 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 IL12RB2Q99665 862 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 LINC00597Q9H2U6 94 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 ATP13A1Q9HD20 1204 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 NT5MQ9NPB1 228 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 IGSF9Q9P2J2 1179 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 TRHDEQ9UKU6 1024 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 WNT6Q9Y6F9 365 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.22■□□□□ 0.35
LMNA-216ENST00000496738 PDE4DIPQ5VU43 2346 aa17.22■□□□□ 0.35
LMNA-216ENST00000496738 HOXD9P28356 352 aaPredicted RBP17.21■□□□□ 0.35
LMNA-216ENST00000496738 MZF1P28698 734 aaPredicted RBP17.21■□□□□ 0.35
LMNA-216ENST00000496738 VIPR2P41587 438 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 MAGEA4P43358 317 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 MAXP61244 160 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 ITPRIPL1Q6GPH6 555 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 ANKRD54Q6NXT1 300 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 MFN1Q8IWA4 741 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 NPAS3Q8IXF0 933 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 SPATA22Q8NHS9 363 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 MLPHQ9BV36 600 aaPredicted RBP17.21■□□□□ 0.35
LMNA-216ENST00000496738 MAGEH1Q9H213 219 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 PABPC3Q9H361 631 aaKnown RBP17.21■□□□□ 0.35
LMNA-216ENST00000496738 NINJ2Q9NZG7 142 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 TBC1D30Q9Y2I9 924 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 MYO18AQ92614 2054 aaKnown RBP17.21■□□□□ 0.35
LMNA-216ENST00000496738 TTC24A2A3L6 582 aaPredicted RBP17.21■□□□□ 0.35
LMNA-216ENST00000496738 CBX4O00257 560 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 USP12O75317 370 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 SHBGP04278 402 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 ITKQ08881 620 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 SLC29A2Q14542 456 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 ANO4Q32M45 955 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 ZNF534Q76KX8 674 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 LRRC49Q8IUZ0 686 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 RSPRY1Q96DX4 576 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 WDR83Q9BRX9 315 aaKnown RBP17.21■□□□□ 0.35
LMNA-216ENST00000496738 VIPAS39Q9H9C1 493 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 LRRC4CQ9HCJ2 640 aa17.21■□□□□ 0.35
LMNA-216ENST00000496738 ILVBLA1L0T0 632 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 RIPK2O43353 540 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 CSKP41240 450 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 MAGEA6P43360 314 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 OXCT1P55809 520 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 IL10RBQ08334 325 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 USP4Q13107 963 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 MARC1Q5VT66 337 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 GPR149Q86SP6 731 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 SETD3Q86TU7 594 aaPredicted RBP17.2■□□□□ 0.34
LMNA-216ENST00000496738 CAND1Q86VP6 1230 aaKnown RBP17.2■□□□□ 0.34
LMNA-216ENST00000496738 TMEM25Q86YD3 366 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 PDIK1LQ8N165 341 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 CPXM2Q8N436 756 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 MAML1Q92585 1016 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 FGF13Q92913 245 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 OXNAD1Q96HP4 312 aaPredicted RBP17.2■□□□□ 0.34
LMNA-216ENST00000496738 LRRC3BQ96PB8 259 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 FOXP3Q9BZS1 431 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 TTYH1Q9H313 450 aaPredicted RBP17.2■□□□□ 0.34
LMNA-216ENST00000496738 AGPSO00116 658 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 PRAMEF11O60813 436 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 ZNF189O75820 626 aaPredicted RBP17.2■□□□□ 0.34
LMNA-216ENST00000496738 MT-CYBP00156 380 aaPredicted RBP17.2■□□□□ 0.34
LMNA-216ENST00000496738 TPSB2P20231 275 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 DLX2Q07687 328 aaPredicted RBP17.2■□□□□ 0.34
LMNA-216ENST00000496738 GRIN2CQ14957 1233 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 TPSAB1Q15661 275 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 MPPE1Q53F39 396 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 DENND2CQ68D51 928 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 IQCKQ8N0W5 287 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 AGGF1Q8N302 714 aaeCLIP17.2■□□□□ 0.34
LMNA-216ENST00000496738 NSMCE1Q8WV22 266 aa17.2■□□□□ 0.34
LMNA-216ENST00000496738 APOL2Q9BQE5 337 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms