RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 GRK2P25098 689 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 MAGEA11P43364 429 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 SLC1A6P48664 564 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 NOGQ13253 232 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 DDR2Q16832 855 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 ANO4Q32M45 955 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 PCID2Q5JVF3 399 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 PIK3R6Q5UE93 754 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 LRRC49Q8IUZ0 686 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 C10orf107Q8IVU9 208 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 WDR75Q8IWA0 830 aaKnown RBP13.27□□□□□ -0.28
GARNL3-220ENST00000496711 CCDC117Q8IWD4 279 aaPredicted RBP13.27□□□□□ -0.28
GARNL3-220ENST00000496711 FAM13CQ8NE31 585 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 AZIN2Q96A70 460 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 SLC39A13Q96H72 371 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 VPS39Q96JC1 886 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 C1orf74Q96LT6 269 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 MCMBPQ9BTE3 642 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 FICDQ9BVA6 458 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 TMEM161AQ9NX61 479 aa13.27□□□□□ -0.28
GARNL3-220ENST00000496711 A0A096LPK6 155 aa13.27□□□□□ -0.29
GARNL3-220ENST00000496711 LYPLA1O75608 230 aaPredicted RBP13.27□□□□□ -0.29
GARNL3-220ENST00000496711 NEBLO76041 1014 aa13.27□□□□□ -0.29
GARNL3-220ENST00000496711 F7P08709 466 aaPredicted RBP13.27□□□□□ -0.29
GARNL3-220ENST00000496711 COL6A1P12109 1028 aa13.27□□□□□ -0.29
GARNL3-220ENST00000496711 HOXD10P28358 340 aa13.27□□□□□ -0.29
GARNL3-220ENST00000496711 GRK4P32298 578 aa13.27□□□□□ -0.29
GARNL3-220ENST00000496711 HADHAP40939 763 aa13.27□□□□□ -0.29
GARNL3-220ENST00000496711 CDK7P50613 346 aa13.27□□□□□ -0.29
GARNL3-220ENST00000496711 TBX4P57082 545 aa13.27□□□□□ -0.29
GARNL3-220ENST00000496711 HSF5Q4G112 596 aaPredicted RBP13.27□□□□□ -0.29
GARNL3-220ENST00000496711 CTXN3Q4LDR2 81 aa13.27□□□□□ -0.29
GARNL3-220ENST00000496711 C14orf80Q86SX3 495 aa13.27□□□□□ -0.29
GARNL3-220ENST00000496711 CLEC14AQ86T13 490 aa13.27□□□□□ -0.29
GARNL3-220ENST00000496711 SLC43A3Q8NBI5 491 aa13.27□□□□□ -0.29
GARNL3-220ENST00000496711 PPHLN1Q8NEY8 458 aaKnown RBP13.27□□□□□ -0.29
GARNL3-220ENST00000496711 PIWIL2Q8TC59 973 aaKnown RBP13.27□□□□□ -0.29
GARNL3-220ENST00000496711 MIPEPQ99797 713 aa13.27□□□□□ -0.29
GARNL3-220ENST00000496711 BTBD10Q9BSF8 475 aa13.27□□□□□ -0.29
GARNL3-220ENST00000496711 STN1Q9H668 368 aaKnown RBP13.27□□□□□ -0.29
GARNL3-220ENST00000496711 STARD7Q9NQZ5 370 aa13.27□□□□□ -0.29
GARNL3-220ENST00000496711 MPP6Q9NZW5 540 aa13.27□□□□□ -0.29
GARNL3-220ENST00000496711 GMIPQ9P107 970 aa13.27□□□□□ -0.29
GARNL3-220ENST00000496711 PPARGC1AQ9UBK2 798 aaKnown RBP13.27□□□□□ -0.29
GARNL3-220ENST00000496711 RPL26L1Q9UNX3 145 aaKnown RBP13.27□□□□□ -0.29
GARNL3-220ENST00000496711 DNAJC16Q9Y2G8 782 aa13.27□□□□□ -0.29
GARNL3-220ENST00000496711 E2F8A0AVK6 867 aa13.26□□□□□ -0.29
GARNL3-220ENST00000496711 ITM2AO43736 263 aa13.26□□□□□ -0.29
GARNL3-220ENST00000496711 AOC2O75106 756 aa13.26□□□□□ -0.29
GARNL3-220ENST00000496711 ESRRAP11474 423 aaPredicted RBP13.26□□□□□ -0.29
GARNL3-220ENST00000496711 CPA3P15088 417 aa13.26□□□□□ -0.29
GARNL3-220ENST00000496711 ABCG1P45844 678 aa13.26□□□□□ -0.29
GARNL3-220ENST00000496711 PAPOLAP51003 745 aaKnown RBP13.26□□□□□ -0.29
GARNL3-220ENST00000496711 MLLT6P55198 1093 aaPredicted RBP13.26□□□□□ -0.29
GARNL3-220ENST00000496711 USP46P62068 366 aa13.26□□□□□ -0.29
GARNL3-220ENST00000496711 ZNF280DQ6N043 979 aa13.26□□□□□ -0.29
GARNL3-220ENST00000496711 PKN3Q6P5Z2 889 aa13.26□□□□□ -0.29
GARNL3-220ENST00000496711 LRRC8DQ7L1W4 858 aa13.26□□□□□ -0.29
GARNL3-220ENST00000496711 PLD6Q8N2A8 252 aaKnown RBP13.26□□□□□ -0.29
GARNL3-220ENST00000496711 RAET1EQ8TD07 263 aa13.26□□□□□ -0.29
GARNL3-220ENST00000496711 PPP4R1Q8TF05 950 aa13.26□□□□□ -0.29
GARNL3-220ENST00000496711 PTCD2Q8WV60 388 aaKnown RBP13.26□□□□□ -0.29
GARNL3-220ENST00000496711 ZNF778Q96MU6 729 aa13.26□□□□□ -0.29
GARNL3-220ENST00000496711 FSD1LQ9BXM9 530 aa13.26□□□□□ -0.29
GARNL3-220ENST00000496711 FAM96AQ9H5X1 160 aa13.26□□□□□ -0.29
GARNL3-220ENST00000496711 CAB39LQ9H9S4 337 aa13.26□□□□□ -0.29
GARNL3-220ENST00000496711 ENTPD7Q9NQZ7 604 aa13.26□□□□□ -0.29
GARNL3-220ENST00000496711 ZNF358Q9NW07 568 aa13.26□□□□□ -0.29
GARNL3-220ENST00000496711 RBM22Q9NW64 420 aaKnown RBP eCLIP13.26□□□□□ -0.294e-6■■■□□ 18.9
GARNL3-220ENST00000496711 ARMCX1Q9P291 453 aa13.26□□□□□ -0.29
GARNL3-220ENST00000496711 TANC1Q9C0D5 1861 aa13.26□□□□□ -0.29
GARNL3-220ENST00000496711 CCDC78A2IDD5 438 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 OR6C75A6NL08 312 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 RALBP11234 206 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 ADRA1AP35348 466 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 GMPRP36959 345 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 GTF2A1P52655 376 aaPredicted RBP13.25□□□□□ -0.29
GARNL3-220ENST00000496711 POU6F1Q14863 301 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 TBCCQ15814 346 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 DENND5AQ6IQ26 1287 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 POTEHQ6S545 545 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 ABI1Q8IZP0 508 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 UMODL1-AS1Q8N2C9 162 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 CD99L2Q8TCZ2 262 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 GPR22Q99680 433 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 CADM1Q9BY67 442 aaKnown RBP13.25□□□□□ -0.29
GARNL3-220ENST00000496711 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.25□□□□□ -0.29
GARNL3-220ENST00000496711 RHOJQ9H4E5 214 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 MRM3Q9HC36 420 aaKnown RBP13.25□□□□□ -0.29
GARNL3-220ENST00000496711 PRDM5Q9NQX1 630 aaPredicted RBP13.25□□□□□ -0.29
GARNL3-220ENST00000496711 IL37Q9NZH6 218 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 IPO11Q9UI26 975 aaKnown RBP13.25□□□□□ -0.29
GARNL3-220ENST00000496711 L3MBTL1Q9Y468 752 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 TCAF1Q9Y4C2 921 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 MRPL42Q9Y6G3 142 aaKnown RBP13.25□□□□□ -0.29
GARNL3-220ENST00000496711 CAPN14A8MX76 684 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 GOLGA8TH3BQL2 631 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 GYG2O15488 501 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 C2P06681 752 aa13.25□□□□□ -0.29
GARNL3-220ENST00000496711 SERPINA6P08185 405 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms