RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 ELF1P32519 619 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 CPA2P48052 419 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 MXRA7P84157 204 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 ITGA7Q13683 1181 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 PKN3Q6P5Z2 889 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 RFWD3Q6PCD5 774 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 POTEHQ6S545 545 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 ARHGAP36Q6ZRI8 547 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 RAPH1Q70E73 1250 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 CLEC14AQ86T13 490 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 ZNF598Q86UK7 904 aaKnown RBP11.26□□□□□ -0.61
CMSS1-208ENST00000496116 SCN4BQ8IWT1 228 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 PLD6Q8N2A8 252 aaKnown RBP11.26□□□□□ -0.61
CMSS1-208ENST00000496116 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.26□□□□□ -0.61
CMSS1-208ENST00000496116 PPHLN1Q8NEY8 458 aaKnown RBP11.26□□□□□ -0.61
CMSS1-208ENST00000496116 IPMKQ8NFU5 416 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 PTCD2Q8WV60 388 aaKnown RBP11.26□□□□□ -0.61
CMSS1-208ENST00000496116 N4BP2L2Q92802 583 aaPredicted RBP11.26□□□□□ -0.61
CMSS1-208ENST00000496116 AZIN2Q96A70 460 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 SORT1Q99523 831 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 GPR22Q99680 433 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 FSD1LQ9BXM9 530 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 SLC39A8Q9C0K1 460 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 RHOJQ9H4E5 214 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 NMRAL1Q9HBL8 299 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 NMRK2Q9NPI5 230 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 ENTPD7Q9NQZ7 604 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 ZNF358Q9NW07 568 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 FNIP2Q9P278 1114 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 STOML1Q9UBI4 398 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 PCDHB12Q9Y5F1 795 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 MYO16Q9Y6X6 1858 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 E2F8A0AVK6 867 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 PRR5-ARHGAP8B1AHC4 643 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 E9PAM4 449 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 MSI1O43347 362 aaKnown RBP11.26□□□□□ -0.61
CMSS1-208ENST00000496116 CABYRO75952 493 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 HSPA4LO95757 839 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 EOMESO95936 686 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 SLC2A3P11169 496 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 ALOX15P16050 662 aaPredicted RBP11.26□□□□□ -0.61
CMSS1-208ENST00000496116 PAMP19021 973 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 TM4SF4P48230 202 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 POLD2P49005 469 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 TUBP50607 506 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 RAP1GDS1P52306 607 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 ARHGAP8P85298 464 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 NRG1Q02297 640 aaPredicted RBP11.26□□□□□ -0.61
CMSS1-208ENST00000496116 PRKCZQ05513 592 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 TRIM32Q13049 653 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 CCDC6Q16204 474 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 KHDC1Q4VXA5 237 aaKnown RBP11.26□□□□□ -0.61
CMSS1-208ENST00000496116 SLC39A12Q504Y0 691 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 CFAP157Q5JU67 520 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 CCSAPQ6IQ19 270 aaPredicted RBP11.26□□□□□ -0.61
CMSS1-208ENST00000496116 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.26□□□□□ -0.618e-7■■■■■ 123.8
CMSS1-208ENST00000496116 TNS4Q8IZW8 715 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 RTL3Q8N8U3 475 aaKnown RBP11.26□□□□□ -0.61
CMSS1-208ENST00000496116 RBM15BQ8NDT2 890 aaKnown RBP11.26□□□□□ -0.61
CMSS1-208ENST00000496116 SPATA22Q8NHS9 363 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 RDH11Q8TC12 318 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 ZNF778Q96MU6 729 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 MCMBPQ9BTE3 642 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 FBXO44Q9H4M3 255 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 CAB39LQ9H9S4 337 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 RGS18Q9NS28 235 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 TRMT13Q9NUP7 481 aaKnown RBP11.26□□□□□ -0.61
CMSS1-208ENST00000496116 ABI2Q9NYB9 513 aaPredicted RBP11.26□□□□□ -0.61
CMSS1-208ENST00000496116 DONSONQ9NYP3 566 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 SLC39A10Q9ULF5 831 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 A0A1W2PQH9 124 aa11.25□□□□□ -0.61
CMSS1-208ENST00000496116 FAM155AB1AL88 458 aaPredicted RBP11.25□□□□□ -0.61
CMSS1-208ENST00000496116 TRIM13O60858 407 aa11.25□□□□□ -0.61
CMSS1-208ENST00000496116 CIB2O75838 187 aa11.25□□□□□ -0.61
CMSS1-208ENST00000496116 MOCS2O96007 188 aaPredicted RBP11.25□□□□□ -0.61
CMSS1-208ENST00000496116 MT-CYBP00156 380 aaPredicted RBP11.25□□□□□ -0.61
CMSS1-208ENST00000496116 DNAJB1P25685 340 aa11.25□□□□□ -0.61
CMSS1-208ENST00000496116 CCND3P30281 292 aaPredicted RBP11.25□□□□□ -0.61
CMSS1-208ENST00000496116 PRKAA2P54646 552 aa11.25□□□□□ -0.61
CMSS1-208ENST00000496116 IRF9Q00978 393 aa11.25□□□□□ -0.61
CMSS1-208ENST00000496116 UBAP2LQ14157 1087 aaKnown RBP11.25□□□□□ -0.61
CMSS1-208ENST00000496116 KPNB1Q14974 876 aaKnown RBP11.25□□□□□ -0.61
CMSS1-208ENST00000496116 NFE2Q16621 373 aaPredicted RBP11.25□□□□□ -0.61
CMSS1-208ENST00000496116 SCD5Q86SK9 330 aa11.25□□□□□ -0.61
CMSS1-208ENST00000496116 MON1AQ86VX9 555 aa11.25□□□□□ -0.61
CMSS1-208ENST00000496116 ZC3HC1Q86WB0 502 aaKnown RBP11.25□□□□□ -0.61
CMSS1-208ENST00000496116 ARHGAP18Q8N392 663 aa11.25□□□□□ -0.61
CMSS1-208ENST00000496116 OR6Y1Q8NGX8 325 aa11.25□□□□□ -0.61
CMSS1-208ENST00000496116 KCNV2Q8TDN2 545 aa11.25□□□□□ -0.61
CMSS1-208ENST00000496116 FUBP3Q96I24 572 aaKnown RBP eCLIP11.25□□□□□ -0.61
CMSS1-208ENST00000496116 C1orf74Q96LT6 269 aa11.25□□□□□ -0.61
CMSS1-208ENST00000496116 FAM161BQ96MY7 647 aa11.25□□□□□ -0.61
CMSS1-208ENST00000496116 MRM3Q9HC36 420 aaKnown RBP11.25□□□□□ -0.61
CMSS1-208ENST00000496116 PNPOQ9NVS9 261 aa11.25□□□□□ -0.61
CMSS1-208ENST00000496116 RBM22Q9NW64 420 aaKnown RBP eCLIP11.25□□□□□ -0.61
CMSS1-208ENST00000496116 HS3ST4Q9Y661 456 aa11.25□□□□□ -0.61
CMSS1-208ENST00000496116 CASP8AP2Q9UKL3 1982 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 KCNU1A8MYU2 1149 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 G3V2L1 256 aa11.24□□□□□ -0.61
CMSS1-208ENST00000496116 GOLGA8TH3BQL2 631 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms