RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 ACE2Q9BYF1 805 aaPredicted RBP24.79■■□□□ 1.56
HLA-C-209ENST00000495835 EDEM3Q9BZQ6 932 aa24.79■■□□□ 1.56
HLA-C-209ENST00000495835 SARDHQ9UL12 918 aa24.79■■□□□ 1.56
HLA-C-209ENST00000495835 SLCO1B1Q9Y6L6 691 aa24.79■■□□□ 1.56
HLA-C-209ENST00000495835 CHD5Q8TDI0 1954 aa24.79■■□□□ 1.56
HLA-C-209ENST00000495835 KNL1Q8NG31 2342 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 TBC1D3DA0A087WVF3 549 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 TBC1D3IA0A087WXS9 549 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 TBC1D3EA0A087X179 549 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 TBC1D3KA0A087X1G2 549 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 TBC1D3FA6NER0 549 aaPredicted RBP24.78■■□□□ 1.56
HLA-C-209ENST00000495835 TBC1D3LB9A6J9 549 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 PRNPP04156 253 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 TBC1D3HP0C7X1 549 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 DESP17661 470 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 ZNF143P52747 638 aaPredicted RBP24.78■■□□□ 1.56
HLA-C-209ENST00000495835 TRIP6Q15654 476 aaKnown RBP24.78■■□□□ 1.56
HLA-C-209ENST00000495835 ZNF423Q2M1K9 1284 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 TBC1D3GQ6DHY5 549 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 TBC1D3CQ6IPX1 549 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 DNAJC24Q6P3W2 148 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 PHLDB2Q86SQ0 1253 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 GLRX5Q86SX6 157 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 TBC1D3Q8IZP1 549 aaPredicted RBP24.78■■□□□ 1.56
HLA-C-209ENST00000495835 SYT11Q9BT88 431 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 FUCA2Q9BTY2 467 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 ATP13A1Q9HD20 1204 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 TMEM248Q9NWD8 314 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 SNX11Q9Y5W9 270 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 PLXNA2O75051 1894 aa24.78■■□□□ 1.56
HLA-C-209ENST00000495835 A0A1B0GTH6 734 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 FLRT2O43155 660 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 ZMPSTE24O75844 475 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 PLEKP08567 350 aaPredicted RBP24.77■■□□□ 1.56
HLA-C-209ENST00000495835 TNFAIP3P21580 790 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 CHRNA3P32297 505 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 CTSKP43235 329 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 GEMIN4P57678 1058 aaKnown RBP24.77■■□□□ 1.56
HLA-C-209ENST00000495835 FOXC1Q12948 553 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 KLHL40Q2TBA0 621 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 SLC45A4Q5BKX6 768 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 PPP1R15BQ5SWA1 713 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 NEK5Q6P3R8 708 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 SLFN11Q7Z7L1 901 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 PRPF39Q86UA1 669 aaKnown RBP24.77■■□□□ 1.56
HLA-C-209ENST00000495835 NLRP14Q86W24 1093 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 PLPP6Q8IY26 295 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 MCOLN2Q8IZK6 566 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 OR7D4Q8NG98 312 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 MAGEH1Q9H213 219 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 EBF2Q9HAK2 575 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 IL21RQ9HBE5 538 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 AIPL1Q9NZN9 384 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 DMTF1Q9Y222 760 aa24.77■■□□□ 1.56
HLA-C-209ENST00000495835 CEP295Q9C0D2 2601 aa24.76■■□□□ 1.55
HLA-C-209ENST00000495835 CBX4O00257 560 aa24.76■■□□□ 1.55
HLA-C-209ENST00000495835 PCDHGA12O60330 932 aa24.76■■□□□ 1.55
HLA-C-209ENST00000495835 CBFA2T3O75081 653 aa24.76■■□□□ 1.55
HLA-C-209ENST00000495835 RRM1P23921 792 aa24.76■■□□□ 1.55
HLA-C-209ENST00000495835 CD38P28907 300 aa24.76■■□□□ 1.55
HLA-C-209ENST00000495835 RECQLP46063 649 aaPredicted RBP24.76■■□□□ 1.55
HLA-C-209ENST00000495835 SERPINH1P50454 418 aaKnown RBP24.76■■□□□ 1.55
HLA-C-209ENST00000495835 C21orf59P57076 290 aa24.76■■□□□ 1.55
HLA-C-209ENST00000495835 CNTN1Q12860 1018 aa24.76■■□□□ 1.55
HLA-C-209ENST00000495835 IQCB1Q15051 598 aa24.76■■□□□ 1.55
HLA-C-209ENST00000495835 RAB6CQ53S08 254 aa24.76■■□□□ 1.55
HLA-C-209ENST00000495835 AGBL4Q5VU57 503 aa24.76■■□□□ 1.55
HLA-C-209ENST00000495835 C22orf39Q6P5X5 142 aa24.76■■□□□ 1.55
HLA-C-209ENST00000495835 TRIM69Q86WT6 500 aa24.76■■□□□ 1.55
HLA-C-209ENST00000495835 PCDH20Q8N6Y1 951 aaKnown RBP24.76■■□□□ 1.55
HLA-C-209ENST00000495835 ISG20Q96AZ6 181 aaKnown RBP24.76■■□□□ 1.55
HLA-C-209ENST00000495835 TBC1D31Q96DN5 1066 aa24.76■■□□□ 1.55
HLA-C-209ENST00000495835 CNPY3Q9BT09 278 aa24.76■■□□□ 1.55
HLA-C-209ENST00000495835 SPON2Q9BUD6 331 aa24.76■■□□□ 1.55
HLA-C-209ENST00000495835 RAB6CQ9H0N0 254 aa24.76■■□□□ 1.55
HLA-C-209ENST00000495835 PREBQ9HCU5 417 aa24.76■■□□□ 1.55
HLA-C-209ENST00000495835 PCOLCE2Q9UKZ9 415 aa24.76■■□□□ 1.55
HLA-C-209ENST00000495835 FNDC3AQ9Y2H6 1198 aaKnown RBP24.76■■□□□ 1.55
HLA-C-209ENST00000495835 CABIN1Q9Y6J0 2220 aa24.76■■□□□ 1.55
HLA-C-209ENST00000495835 TMEM131Q92545 1883 aa24.75■■□□□ 1.55
HLA-C-209ENST00000495835 SPAARA0A1B0GVQ0 90 aa24.75■■□□□ 1.55
HLA-C-209ENST00000495835 SMAD6O43541 496 aaKnown RBP24.75■■□□□ 1.55
HLA-C-209ENST00000495835 LRIG2O94898 1065 aa24.75■■□□□ 1.55
HLA-C-209ENST00000495835 GJB6O95452 261 aa24.75■■□□□ 1.55
HLA-C-209ENST00000495835 L1CAMP32004 1257 aa24.75■■□□□ 1.55
HLA-C-209ENST00000495835 RWDD4Q6NW29 188 aaKnown RBP24.75■■□□□ 1.55
HLA-C-209ENST00000495835 DRC7Q8IY82 874 aa24.75■■□□□ 1.55
HLA-C-209ENST00000495835 CDC6Q99741 560 aa24.75■■□□□ 1.55
HLA-C-209ENST00000495835 K7ERQ8 282 aa24.74■■□□□ 1.55
HLA-C-209ENST00000495835 BNIP3LO60238 219 aa24.74■■□□□ 1.55
HLA-C-209ENST00000495835 RTN2O75298 545 aa24.74■■□□□ 1.55
HLA-C-209ENST00000495835 GZMAP12544 262 aa24.74■■□□□ 1.55
HLA-C-209ENST00000495835 PTMSP20962 102 aa24.74■■□□□ 1.55
HLA-C-209ENST00000495835 PRKCIP41743 596 aa24.74■■□□□ 1.55
HLA-C-209ENST00000495835 CCT8P50990 548 aa24.74■■□□□ 1.55
HLA-C-209ENST00000495835 METAP1P53582 386 aa24.74■■□□□ 1.55
HLA-C-209ENST00000495835 TPM4P67936 248 aa24.74■■□□□ 1.55
HLA-C-209ENST00000495835 OVGP1Q12889 678 aa24.74■■□□□ 1.55
HLA-C-209ENST00000495835 NR1I3Q14994 352 aa24.74■■□□□ 1.55
HLA-C-209ENST00000495835 FIGNQ5HY92 759 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms