RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327	HGSNAT	Q68CP4	663 aa		13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	KIAA0895L	Q68EN5	471 aa		13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	RETSAT	Q6NUM9	610 aa		13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	RWDD4	Q6NW29	188 aa	Known RBP	13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	TMC6	Q7Z403	805 aa		13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	DRC7	Q8IY82	874 aa		13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	HDDC3	Q8N4P3	179 aa		13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	GANC	Q8TET4	914 aa		13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	FNIP1	Q8TF40	1166 aa		13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	SNX19	Q92543	992 aa		13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	TRIM11	Q96F44	468 aa		13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	ORAI3	Q9BRQ5	295 aa		13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	GTPBP2	Q9BX10	602 aa	Known RBP	13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	ACE2	Q9BYF1	805 aa	Predicted RBP	13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	CEP44	Q9C0F1	390 aa		13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	MIR1-1HG	Q9H1L0	117 aa		13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	NEUROG2	Q9H2A3	272 aa		13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	KDM4C	Q9H3R0	1056 aa		13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	ATP13A1	Q9HD20	1204 aa		13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	NDFIP2	Q9NV92	336 aa		13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	PPM1H	Q9ULR3	514 aa		13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	FZD10	Q9ULW2	581 aa		13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	BZW2	Q9Y6E2	419 aa	Known RBP	13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	SCIN	Q9Y6U3	715 aa		13.64	□□□□□ -0.23
RBM28-208	ENST00000495327	ATMIN	O43313	823 aa	Predicted RBP	13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	OPHN1	O60890	802 aa		13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	GJB3	O75712	270 aa		13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	MYBL1	P10243	752 aa		13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	GLDC	P23378	1020 aa		13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	HTR7	P34969	479 aa		13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	GRIA4	P48058	902 aa		13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	AFF3	P51826	1226 aa	Known RBP	13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	ZBED6	P86452	979 aa		13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	UAP1L1	Q3KQV9	507 aa		13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	TDRD12	Q587J7	1177 aa	Known RBP	13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	NCEH1	Q6PIU2	408 aa		13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	OR2A12	Q8NGT7	310 aa		13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	PIP4K2C	Q8TBX8	421 aa		13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	ARHGEF2	Q92974	986 aa	Known RBP	13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	EPAS1	Q99814	870 aa		13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	ISCU	Q9H1K1	167 aa		13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	MAGEH1	Q9H213	219 aa		13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	TM9SF3	Q9HD45	589 aa		13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	IFNK	Q9P0W0	207 aa		13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	SARDH	Q9UL12	918 aa		13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	CAPN11	Q9UMQ6	739 aa		13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	SLCO1B1	Q9Y6L6	691 aa		13.63	□□□□□ -0.23
RBM28-208	ENST00000495327	DOCK9	Q9BZ29	2069 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	TMEM191C	A6NGB0	347 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	WASH4P	A8MWX3	477 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	EIF3CL	B5ME19	914 aa	Known RBP	13.62	□□□□□ -0.23
RBM28-208	ENST00000495327		K7ERQ8	282 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	CBX4	O00257	560 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	SMAD6	O43541	496 aa	Known RBP	13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	PLRG1	O43660	514 aa	Known RBP	13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	RAMP2	O60895	175 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	FSBP	O95073	299 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	CER1	O95813	267 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	FTL	P02792	175 aa	Predicted RBP	13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	GYPC	P04921	128 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	SERPING1	P05155	500 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	TPM3	P06753	285 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	SKIL	P12757	684 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	CEACAM1	P13688	526 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	PSMA2	P25787	234 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	CCR5	P51681	352 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	METAP1	P53582	386 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	GEMIN4	P57678	1058 aa	Known RBP	13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	ZNF252P-AS1	Q0IIN9	211 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	SLC14A1	Q13336	389 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	AGBL4	Q5VU57	503 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	PSAPL1	Q6NUJ1	521 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	SCYL2	Q6P3W7	929 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	IL27RA	Q6UWB1	636 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	LINGO4	Q6UY18	593 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	PIP4P1	Q86T03	277 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	PYROXD2	Q8N2H3	581 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	PCDH20	Q8N6Y1	951 aa	Known RBP	13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	RTL3	Q8N8U3	475 aa	Known RBP	13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	TMIE	Q8NEW7	156 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	ZNF653	Q96CK0	615 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	EIF3C	Q99613	913 aa	Known RBP	13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	SPON2	Q9BUD6	331 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	MAGEB5	Q9BZ81	275 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	CNOT8	Q9UFF9	292 aa	Known RBP	13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	DNAI1	Q9UI46	699 aa		13.62	□□□□□ -0.23
RBM28-208	ENST00000495327	PCNX2	A6NKB5	2137 aa		13.61	□□□□□ -0.23
RBM28-208	ENST00000495327		A0A1W2PPC4	97 aa		13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	FAM47DP	A6NHR8	397 aa		13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	FGF10	O15520	208 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	LAT	O43561	262 aa		13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	ZNF821	O75541	412 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	CD160	O95971	181 aa		13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	PRNP	P04156	253 aa		13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	CTSL	P07711	333 aa		13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	ZNF883	P0CG24	379 aa		13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	EPHB2	P29323	1055 aa		13.61	□□□□□ -0.23
RBM28-208	ENST00000495327	CHRNA3	P32297	505 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms