RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 MSLNLQ96KJ4 702 aa11.25□□□□□ -0.61
PKP4-215ENST00000494945 NECTIN4Q96NY8 510 aa11.25□□□□□ -0.61
PKP4-215ENST00000494945 AGAP3Q96P47 875 aa11.25□□□□□ -0.61
PKP4-215ENST00000494945 GAS2L1Q99501 681 aaPredicted RBP11.25□□□□□ -0.61
PKP4-215ENST00000494945 CEP41Q9BYV8 373 aa11.25□□□□□ -0.61
PKP4-215ENST00000494945 TXLNGYQ9BZA5 131 aa11.25□□□□□ -0.61
PKP4-215ENST00000494945 MUC3BQ9H195 1237 aa11.25□□□□□ -0.61
PKP4-215ENST00000494945 PDFQ9HBH1 243 aa11.25□□□□□ -0.61
PKP4-215ENST00000494945 ATP13A1Q9HD20 1204 aa11.25□□□□□ -0.61
PKP4-215ENST00000494945 SPHK2Q9NRA0 654 aa11.25□□□□□ -0.61
PKP4-215ENST00000494945 RBM22Q9NW64 420 aaKnown RBP eCLIP11.25□□□□□ -0.61
PKP4-215ENST00000494945 GOLGA6AQ9NYA3 693 aa11.25□□□□□ -0.61
PKP4-215ENST00000494945 MARK1Q9P0L2 795 aa11.25□□□□□ -0.61
PKP4-215ENST00000494945 KIAA1522Q9P206 1035 aaPredicted RBP11.25□□□□□ -0.61
PKP4-215ENST00000494945 RSPH14Q9UHP6 348 aa11.25□□□□□ -0.61
PKP4-215ENST00000494945 COL4A2P08572 1712 aa11.25□□□□□ -0.61
PKP4-215ENST00000494945 MUC22E2RYF6 1773 aaPredicted RBP11.25□□□□□ -0.61
PKP4-215ENST00000494945 ZNF106Q9H2Y7 1883 aaKnown RBP11.24□□□□□ -0.61
PKP4-215ENST00000494945 A0A0D9SEW6 157 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 CXorf51AA0A1B0GTR3 108 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 EIF3HO15372 352 aaKnown RBP eCLIP11.24□□□□□ -0.61
PKP4-215ENST00000494945 NEBLO76041 1014 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 TMEM63AO94886 807 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 APRTP07741 180 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 NFKB1P19838 968 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 IGFBP4P22692 258 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 PSMB4P28070 264 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 CD68P34810 354 aaPredicted RBP11.24□□□□□ -0.61
PKP4-215ENST00000494945 LTBRP36941 435 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 MMP13P45452 471 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 LMAN1P49257 510 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 PLK1P53350 603 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 ARL4CP56559 192 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 SARNPP82979 210 aaKnown RBP11.24□□□□□ -0.61
PKP4-215ENST00000494945 DLX2Q07687 328 aaPredicted RBP11.24□□□□□ -0.61
PKP4-215ENST00000494945 ADGRE1Q14246 886 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 CASP8Q14790 479 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 HIF1AQ16665 826 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 FSCBQ5H9T9 825 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 FAXCQ5TGI0 409 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 ANKRD22Q5VYY1 191 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 TMEM25Q86YD3 366 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 RELL1Q8IUW5 271 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 KLHDC8BQ8IXV7 354 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 BBS5Q8N3I7 341 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 TAB3Q8N5C8 712 aaPredicted RBP11.24□□□□□ -0.61
PKP4-215ENST00000494945 CNTD1Q8N815 330 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 OR52K2Q8NGK3 314 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 USP33Q8TEY7 942 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 GDAP1L1Q96MZ0 367 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 FCRL5Q96RD9 977 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 RBM15Q96T37 977 aaKnown RBP eCLIP11.24□□□□□ -0.61
PKP4-215ENST00000494945 FEM1AQ9BSK4 669 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 SPON2Q9BUD6 331 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 BBS2Q9BXC9 721 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 FUT8Q9BYC5 575 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 SLC2A11Q9BYW1 496 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 VIPAS39Q9H9C1 493 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 GLOD4Q9HC38 313 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 ZNF446Q9NWS9 450 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 DUS2Q9NX74 493 aaKnown RBP11.24□□□□□ -0.61
PKP4-215ENST00000494945 UBA2Q9UBT2 640 aaPredicted RBP11.24□□□□□ -0.61
PKP4-215ENST00000494945 ATP8A1Q9Y2Q0 1164 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 OR51B4Q9Y5P0 310 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 WNT6Q9Y6F9 365 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 SCN8AQ9UQD0 1980 aa11.24□□□□□ -0.61
PKP4-215ENST00000494945 TCF20Q9UGU0 1960 aaKnown RBP11.23□□□□□ -0.61
PKP4-215ENST00000494945 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.23□□□□□ -0.61
PKP4-215ENST00000494945 TCRBV7S3A2A0A539 114 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 HEPACAM2A8MVW5 462 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 ANXA9O76027 345 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 ADH1CP00326 375 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 HLA-DQB2P05538 268 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 MLNP12872 115 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 FCARP24071 287 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 CSKP41240 450 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 VIPR2P41587 438 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 PMS2P54278 862 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 GEMIN4P57678 1058 aaKnown RBP11.23□□□□□ -0.61
PKP4-215ENST00000494945 SLC10A7Q0GE19 358 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 ZNF235Q14590 738 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 LBRQ14739 615 aaKnown RBP11.23□□□□□ -0.61
PKP4-215ENST00000494945 PDGFRLQ15198 375 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 EML3Q32P44 896 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 EP400NLQ6ZTU2 488 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 CENPUQ71F23 418 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 TRMT10CQ7L0Y3 403 aaKnown RBP11.23□□□□□ -0.61
PKP4-215ENST00000494945 CCDC25Q86WR0 208 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 ADGRG2Q8IZP9 1017 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 PDIK1LQ8N165 341 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 DCAF4L2Q8NA75 395 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 WFDC5Q8TCV5 224 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 ACDQ96AP0 544 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 RSPRY1Q96DX4 576 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 ALG14Q96F25 216 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 LRRC3BQ96PB8 259 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 C2orf49Q9BVC5 232 aaPredicted RBP11.23□□□□□ -0.61
PKP4-215ENST00000494945 SLC25A51Q9H1U9 297 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 LINC00597Q9H2U6 94 aa11.23□□□□□ -0.61
PKP4-215ENST00000494945 ZFP14Q9HCL3 533 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms