RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 LCLAT1Q6UWP7 414 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 H2AFVQ71UI9 128 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 MMAAQ8IVH4 418 aaKnown RBP12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 AHI1Q8N157 1196 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 CFAP52Q8N1V2 620 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 AADATQ8N5Z0 425 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 ANKRD52Q8NB46 1076 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 ACRBPQ8NEB7 543 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 SLC30A5Q8TAD4 765 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 NAF1Q96HR8 494 aaKnown RBP12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 VCPIP1Q96JH7 1222 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 DESI2Q9BSY9 194 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 SGK2Q9HBY8 427 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 LCMT1Q9UIC8 334 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 TSPAN16Q9UKR8 245 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 CA5BQ9Y2D0 317 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 PCDHA13Q9Y5I0 950 aa12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 COL5A1P20908 1838 aaPredicted RBP12.11□□□□□ -0.47
CSNK1E-212ENST00000494610 BTNL10A8MVZ5 291 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 ATXN7O15265 892 aaPredicted RBP12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 BRINP1O60477 761 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 SDC3O75056 442 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 CYP1A1P04798 512 aaPredicted RBP12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 TMEM253P0C7T8 217 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 C7P10643 843 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 MYF5P13349 255 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 POLR2EP19388 210 aaKnown RBP12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 CSKP41240 450 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 PSMD8P48556 350 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 RPS24P62847 133 aaKnown RBP12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 NOMO3P69849 1222 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 C1QBPQ07021 282 aaKnown RBP12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 BST2Q10589 180 aaKnown RBP12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 CST6Q15828 149 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 C9orf64Q5T6V5 341 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 PIK3R6Q5UE93 754 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 ACAD10Q6JQN1 1059 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 FBXL19Q6PCT2 694 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 SPATS2Q86XZ4 545 aaKnown RBP12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 RHOT2Q8IXI1 618 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 ARHGAP18Q8N392 663 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 WFIKKN2Q8TEU8 576 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 RNF139Q8WU17 664 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 TSC1Q92574 1164 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 NXPE2Q96DL1 559 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 ALS2CR12Q96Q35 445 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 ISCUQ9H1K1 167 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 MYO1AQ9UBC5 1043 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 SLCO3A1Q9UIG8 710 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 STOML2Q9UJZ1 356 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 NENFQ9UMX5 172 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 SCINQ9Y6U3 715 aa12.1□□□□□ -0.47
CSNK1E-212ENST00000494610 NYNRINQ9P2P1 1898 aaKnown RBP12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 A0A0A6YYK5 440 aaPredicted RBP12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 PJA2O43164 708 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 PAPSS1O43252 624 aaPredicted RBP12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 UNGP13051 313 aaPredicted RBP12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 DESP17661 470 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 CHRNB2P17787 502 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 CD38P28907 300 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 EPHA8P29322 1005 aaPredicted RBP12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 MAT2AP31153 395 aaKnown RBP12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 ACADSBP45954 432 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 STK19P49842 368 aaPredicted RBP12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 ZBTB16Q05516 673 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 TTC31Q49AM3 519 aaPredicted RBP12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 C6orf118Q5T5N4 469 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 NAA35Q5VZE5 725 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 PHF13Q86YI8 300 aaPredicted RBP12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 APCDD1Q8J025 514 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 STK40Q8N2I9 435 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 CARNMT1Q8N4J0 409 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 STK32AQ8WU08 396 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 UBE2Q2Q8WVN8 375 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 RFFLQ8WZ73 363 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 TFAP2BQ92481 460 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 PPP1R13BQ96KQ4 1090 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 RPL10LQ96L21 214 aaKnown RBP12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 FAM129BQ96TA1 746 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 ZSWIM1Q9BR11 485 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 UBXN6Q9BZV1 441 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 SYNCQ9H7C4 482 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 LRRC4Q9HBW1 653 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 XPO7Q9UIA9 1087 aaKnown RBP12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 NCKAP1Q9Y2A7 1128 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 HBS1LQ9Y450 684 aaKnown RBP12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 PCDHB1Q9Y5F3 818 aa12.09□□□□□ -0.47
CSNK1E-212ENST00000494610 TDRD6O60522 2096 aaKnown RBP12.08□□□□□ -0.48
CSNK1E-212ENST00000494610 C10orf142B7Z368 130 aa12.08□□□□□ -0.48
CSNK1E-212ENST00000494610 XPO1O14980 1071 aaKnown RBP12.08□□□□□ -0.48
CSNK1E-212ENST00000494610 KIF5CO60282 957 aa12.08□□□□□ -0.48
CSNK1E-212ENST00000494610 ZNF500O60304 480 aaPredicted RBP12.08□□□□□ -0.48
CSNK1E-212ENST00000494610 FTLP02792 175 aaPredicted RBP12.08□□□□□ -0.48
CSNK1E-212ENST00000494610 ATP5BP06576 529 aaKnown RBP12.08□□□□□ -0.48
CSNK1E-212ENST00000494610 SLC8A1P32418 973 aa12.08□□□□□ -0.48
CSNK1E-212ENST00000494610 GSCP56915 257 aaPredicted RBP12.08□□□□□ -0.48
CSNK1E-212ENST00000494610 NXPH1P58417 271 aa12.08□□□□□ -0.48
CSNK1E-212ENST00000494610 DAOAP59103 153 aa12.08□□□□□ -0.48
CSNK1E-212ENST00000494610 CXADRP78310 365 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms