RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 PRKCIP41743 596 aa33.97■■■■□ 3.03
CBX4-203ENST00000494546 CLCN6P51797 869 aa33.97■■■■□ 3.03
CBX4-203ENST00000494546 UBASH3AP57075 661 aa33.97■■■■□ 3.03
CBX4-203ENST00000494546 BNC1Q01954 994 aa33.97■■■■□ 3.03
CBX4-203ENST00000494546 TEAD4Q15561 434 aa33.97■■■■□ 3.03
CBX4-203ENST00000494546 RETSATQ6NUM9 610 aa33.97■■■■□ 3.03
CBX4-203ENST00000494546 DNAAF5Q86Y56 855 aa33.97■■■■□ 3.03
CBX4-203ENST00000494546 DNAI1Q9UI46 699 aa33.97■■■■□ 3.03
CBX4-203ENST00000494546 DOCK4Q8N1I0 1966 aa33.97■■■■□ 3.03
CBX4-203ENST00000494546 ASCC3Q8N3C0 2202 aaKnown RBP33.97■■■■□ 3.03
CBX4-203ENST00000494546 ATMINO43313 823 aaPredicted RBP33.96■■■■□ 3.03
CBX4-203ENST00000494546 SKILP12757 684 aa33.96■■■■□ 3.03
CBX4-203ENST00000494546 DESP17661 470 aa33.96■■■■□ 3.03
CBX4-203ENST00000494546 ZNF252P-AS1Q0IIN9 211 aa33.96■■■■□ 3.03
CBX4-203ENST00000494546 SCAPQ12770 1279 aa33.96■■■■□ 3.03
CBX4-203ENST00000494546 EFHC2Q5JST6 749 aa33.96■■■■□ 3.03
CBX4-203ENST00000494546 NLRP14Q86W24 1093 aa33.96■■■■□ 3.03
CBX4-203ENST00000494546 PYROXD2Q8N2H3 581 aa33.96■■■■□ 3.03
CBX4-203ENST00000494546 ORAI3Q9BRQ5 295 aa33.96■■■■□ 3.03
CBX4-203ENST00000494546 TNKS2Q9H2K2 1166 aa33.96■■■■□ 3.03
CBX4-203ENST00000494546 GAREM1Q9H706 876 aa33.96■■■■□ 3.03
CBX4-203ENST00000494546 OSGEPQ9NPF4 335 aa33.96■■■■□ 3.03
CBX4-203ENST00000494546 NDFIP2Q9NV92 336 aa33.96■■■■□ 3.03
CBX4-203ENST00000494546 PARVAQ9NVD7 372 aa33.96■■■■□ 3.03
CBX4-203ENST00000494546 GJB3O75712 270 aa33.95■■■■□ 3.03
CBX4-203ENST00000494546 ZMPSTE24O75844 475 aa33.95■■■■□ 3.03
CBX4-203ENST00000494546 CD59P13987 128 aa33.95■■■■□ 3.03
CBX4-203ENST00000494546 MAPKAPK2P49137 400 aa33.95■■■■□ 3.03
CBX4-203ENST00000494546 OGDHQ02218 1023 aa33.95■■■■□ 3.03
CBX4-203ENST00000494546 MAMLD1Q13495 774 aa33.95■■■■□ 3.03
CBX4-203ENST00000494546 FIGNQ5HY92 759 aa33.95■■■■□ 3.03
CBX4-203ENST00000494546 C22orf39Q6P5X5 142 aa33.95■■■■□ 3.03
CBX4-203ENST00000494546 IL27RAQ6UWB1 636 aa33.95■■■■□ 3.03
CBX4-203ENST00000494546 LAYNQ6UX15 382 aa33.95■■■■□ 3.03
CBX4-203ENST00000494546 PIP4P1Q86T03 277 aa33.95■■■■□ 3.03
CBX4-203ENST00000494546 OR2A12Q8NGT7 310 aa33.95■■■■□ 3.03
CBX4-203ENST00000494546 TMEM248Q9NWD8 314 aa33.95■■■■□ 3.03
CBX4-203ENST00000494546 NEU3Q9UQ49 428 aa33.95■■■■□ 3.03
CBX4-203ENST00000494546 TBC1D3DA0A087WVF3 549 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 TBC1D3IA0A087WXS9 549 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 TBC1D3EA0A087X179 549 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 TBC1D3KA0A087X1G2 549 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 A0A1W2PPC4 97 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 TBC1D3FA6NER0 549 aaPredicted RBP33.94■■■■□ 3.02
CBX4-203ENST00000494546 UPK3BL1B0FP48 263 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 TBC1D3LB9A6J9 549 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 UPK3BL2E5RIL1 263 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 RTN2O75298 545 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 CER1O95813 267 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 TBC1D3HP0C7X1 549 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 CHRNA3P32297 505 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 ACVRL1P37023 503 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 GRIA4P48058 902 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 CNTN1Q12860 1018 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 HLA-BQ31612 363 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 TBC1D3GQ6DHY5 549 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 TBC1D3CQ6IPX1 549 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 TMC6Q7Z403 805 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 ADAT2Q7Z6V5 191 aaKnown RBP33.94■■■■□ 3.02
CBX4-203ENST00000494546 TBC1D3Q8IZP1 549 aaPredicted RBP33.94■■■■□ 3.02
CBX4-203ENST00000494546 RETREG1Q9H6L5 497 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 IL21RQ9HBE5 538 aa33.94■■■■□ 3.02
CBX4-203ENST00000494546 CACNA1EQ15878 2313 aa33.93■■■■□ 3.02
CBX4-203ENST00000494546 DDX3XO00571 662 aaKnown RBP eCLIP33.93■■■■□ 3.021e-23■■□□□ 13.3
CBX4-203ENST00000494546 FTLP02792 175 aaPredicted RBP33.93■■■■□ 3.02
CBX4-203ENST00000494546 CTSLP07711 333 aa33.93■■■■□ 3.02
CBX4-203ENST00000494546 ETFBP38117 255 aa33.93■■■■□ 3.02
CBX4-203ENST00000494546 RECQLP46063 649 aaPredicted RBP33.93■■■■□ 3.02
CBX4-203ENST00000494546 SERPINH1P50454 418 aaKnown RBP33.93■■■■□ 3.02
CBX4-203ENST00000494546 ARF5P84085 180 aa33.93■■■■□ 3.02
CBX4-203ENST00000494546 SLC20A2Q08357 652 aa33.93■■■■□ 3.02
CBX4-203ENST00000494546 SLC14A1Q13336 389 aa33.93■■■■□ 3.02
CBX4-203ENST00000494546 KIF19Q2TAC6 998 aa33.93■■■■□ 3.02
CBX4-203ENST00000494546 PLEKHA7Q6IQ23 1121 aa33.93■■■■□ 3.02
CBX4-203ENST00000494546 FZD10Q9ULW2 581 aa33.93■■■■□ 3.02
CBX4-203ENST00000494546 ANKRD6Q9Y2G4 727 aa33.93■■■■□ 3.02
CBX4-203ENST00000494546 KPNA3O00505 521 aaPredicted RBP33.92■■■■□ 3.02
CBX4-203ENST00000494546 GZMAP12544 262 aa33.92■■■■□ 3.02
CBX4-203ENST00000494546 PSMA2P25787 234 aa33.92■■■■□ 3.02
CBX4-203ENST00000494546 L1CAMP32004 1257 aa33.92■■■■□ 3.02
CBX4-203ENST00000494546 PBX1P40424 430 aa33.92■■■■□ 3.02
CBX4-203ENST00000494546 CCR5P51681 352 aa33.92■■■■□ 3.02
CBX4-203ENST00000494546 SKOR2Q2VWA4 1001 aaPredicted RBP33.92■■■■□ 3.02
CBX4-203ENST00000494546 CHST14Q8NCH0 376 aa33.92■■■■□ 3.02
CBX4-203ENST00000494546 SLC6A18Q96N87 628 aa33.92■■■■□ 3.02
CBX4-203ENST00000494546 ACE2Q9BYF1 805 aaPredicted RBP33.92■■■■□ 3.02
CBX4-203ENST00000494546 EBF2Q9HAK2 575 aa33.92■■■■□ 3.02
CBX4-203ENST00000494546 SNX11Q9Y5W9 270 aa33.92■■■■□ 3.02
CBX4-203ENST00000494546 SLC7A4O43246 635 aa33.91■■■■□ 3.02
CBX4-203ENST00000494546 CREB3O43889 395 aa33.91■■■■□ 3.02
CBX4-203ENST00000494546 RAMP2O60895 175 aa33.91■■■■□ 3.02
CBX4-203ENST00000494546 EPHB2P29323 1055 aa33.91■■■■□ 3.02
CBX4-203ENST00000494546 PMLP29590 882 aa33.91■■■■□ 3.02
CBX4-203ENST00000494546 DNA2P51530 1060 aa33.91■■■■□ 3.02
CBX4-203ENST00000494546 RACK1P63244 317 aaKnown RBP33.91■■■■□ 3.02
CBX4-203ENST00000494546 AGBL4Q5VU57 503 aa33.91■■■■□ 3.02
CBX4-203ENST00000494546 GRIN3AQ8TCU5 1115 aa33.91■■■■□ 3.02
CBX4-203ENST00000494546 CPLX3Q8WVH0 158 aa33.91■■■■□ 3.02
CBX4-203ENST00000494546 ARHGEF2Q92974 986 aaKnown RBP33.91■■■■□ 3.02
CBX4-203ENST00000494546 FAM131CQ96AQ9 280 aa33.91■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms