RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 METTL3Q86U44 580 aaKnown RBP12.73□□□□□ -0.37
TRA2A-209ENST00000494255 VSIG1Q86XK7 387 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 TMPRSS6Q8IU80 811 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.73□□□□□ -0.37
TRA2A-209ENST00000494255 PRCCQ92733 491 aaPredicted RBP12.73□□□□□ -0.37
TRA2A-209ENST00000494255 SIPA1Q96FS4 1042 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 MRGPRX1Q96LB2 322 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 MAK16Q9BXY0 300 aaKnown RBP12.73□□□□□ -0.37
TRA2A-209ENST00000494255 SLC39A8Q9C0K1 460 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 KLC2Q9H0B6 622 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 MTG2Q9H4K7 406 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 ETNK2Q9NVF9 386 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 R4GN57 208 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 NUP205Q92621 2012 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 GRID2IPA4D2P6 1211 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 BNIP3LO60238 219 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 ACADMP11310 421 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 IL4RP24394 825 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 RECQLP46063 649 aaPredicted RBP12.73□□□□□ -0.37
TRA2A-209ENST00000494255 PAPOLAP51003 745 aaKnown RBP12.73□□□□□ -0.37
TRA2A-209ENST00000494255 ARF5P84085 180 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 C9orf64Q5T6V5 341 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 AFMIDQ63HM1 303 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 ZNF776Q68DI1 518 aaPredicted RBP12.73□□□□□ -0.37
TRA2A-209ENST00000494255 C22orf39Q6P5X5 142 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 Q6ZVU0 165 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 CEP68Q76N32 757 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 DSG4Q86SJ6 1040 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 ARHGAP12Q8IWW6 846 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 NPWQ8N729 165 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 LRRC57Q8N9N7 239 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 PCDH19Q8TAB3 1148 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 FRS2Q8WU20 508 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 OR8D1Q8WZ84 308 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 RNF25Q96BH1 459 aaPredicted RBP12.73□□□□□ -0.37
TRA2A-209ENST00000494255 FAF2Q96CS3 445 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 SPACA7Q96KW9 195 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 CEP44Q9C0F1 390 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 MKRN2Q9H000 416 aaKnown RBP12.73□□□□□ -0.37
TRA2A-209ENST00000494255 SP110Q9HB58 689 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 FAM86C1Q9NVL1 165 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 AMFRQ9UKV5 643 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 CCDC66A2RUB6 948 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 K7ERQ8 282 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 SMAD6O43541 496 aaKnown RBP12.72□□□□□ -0.37
TRA2A-209ENST00000494255 ZNF217O75362 1048 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 PALMO75781 387 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 RPP40O75818 363 aaKnown RBP12.72□□□□□ -0.37
TRA2A-209ENST00000494255 DNA2P51530 1060 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 COPAP53621 1224 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 ELAVL3Q14576 367 aaKnown RBP12.72□□□□□ -0.37
TRA2A-209ENST00000494255 LEKR1Q6ZMV7 388 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 PEX26Q7Z412 305 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 RFX6Q8HWS3 928 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 KATNAL2Q8IYT4 538 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 RCOR2Q8IZ40 523 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 STK40Q8N2I9 435 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 PCDH20Q8N6Y1 951 aaKnown RBP12.72□□□□□ -0.37
TRA2A-209ENST00000494255 GAB3Q8WWW8 586 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 CASKIN2Q8WXE0 1202 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 PTPRN2Q92932 1015 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 RBM41Q96IZ5 413 aaKnown RBP12.72□□□□□ -0.37
TRA2A-209ENST00000494255 RNF157Q96PX1 679 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 SLC6A17Q9H1V8 727 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 RSPH9Q9H1X1 276 aaPredicted RBP12.72□□□□□ -0.37
TRA2A-209ENST00000494255 LZTFL1Q9NQ48 299 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 UBA2Q9UBT2 640 aaPredicted RBP12.72□□□□□ -0.37
TRA2A-209ENST00000494255 PPP2R2CQ9Y2T4 447 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 MFHAS1Q9Y4C4 1052 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 NYNRINQ9P2P1 1898 aaKnown RBP12.72□□□□□ -0.37
TRA2A-209ENST00000494255 FANCMQ8IYD8 2048 aa12.72□□□□□ -0.37
TRA2A-209ENST00000494255 C3orf70A6NLC5 250 aaPredicted RBP12.71□□□□□ -0.37
TRA2A-209ENST00000494255 APOL1O14791 398 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 ALOX15BO15296 676 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 PRAMEF11O60813 436 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 LILRB5O75023 590 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 ZRANB2O95218 330 aaKnown RBP eCLIP12.71□□□□□ -0.375e-6■■■□□ 15.5
TRA2A-209ENST00000494255 DNTTP04053 509 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 VAV1P15498 845 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 ZFXP17010 805 aaPredicted RBP12.71□□□□□ -0.37
TRA2A-209ENST00000494255 CTNNA2P26232 953 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 CTNNA1P35221 906 aaKnown RBP12.71□□□□□ -0.37
TRA2A-209ENST00000494255 ZBTB16Q05516 673 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 CCDC173Q0VFZ6 552 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 SFSWAPQ12872 951 aaKnown RBP12.71□□□□□ -0.37
TRA2A-209ENST00000494255 TTC31Q49AM3 519 aaPredicted RBP12.71□□□□□ -0.37
TRA2A-209ENST00000494255 MFSD7Q6UXD7 560 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 ZNF662Q6ZS27 426 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 NT5DC3Q86UY8 548 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 CACUL1Q86Y37 369 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 LRRC49Q8IUZ0 686 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 CCDC50Q8IVM0 306 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 ATPAF2Q8N5M1 289 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 NETO2Q8NC67 525 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 EXD1Q8NHP7 514 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 ISG20Q96AZ6 181 aaKnown RBP12.71□□□□□ -0.37
TRA2A-209ENST00000494255 ZNF830Q96NB3 372 aaPredicted RBP12.71□□□□□ -0.37
TRA2A-209ENST00000494255 TNKS2Q9H2K2 1166 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 SEMA4AQ9H3S1 761 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 IPO11Q9UI26 975 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms