RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 PRTGQ2VWP7 1150 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 C5orf22Q49AR2 442 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 CTXN3Q4LDR2 81 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 OTUD1Q5VV17 481 aaPredicted RBP2.59□□□□□ -1.99
LMNB1-207ENST00000494185 NAA35Q5VZE5 725 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 TMEM268Q5VZI3 342 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 KIAA1324Q6UXG2 1013 aaKnown RBP2.59□□□□□ -1.99
LMNB1-207ENST00000494185 C4orf50Q6ZRC1 276 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 NEK10Q6ZWH5 1172 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 RASGRP2Q7LDG7 609 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 GALNT7Q86SF2 657 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 TBC1D1Q86TI0 1168 aaPredicted RBP2.59□□□□□ -1.99
LMNB1-207ENST00000494185 CPOQ8IVL8 374 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 MMP21Q8N119 569 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 CEP70Q8NHQ1 597 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 BICD2Q8TD16 824 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 NCSTNQ92542 709 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 KCNJ9Q92806 393 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 ATP2A3Q93084 1043 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 RILPL2Q969X0 211 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 ERP27Q96DN0 273 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 KTI12Q96EK9 354 aaPredicted RBP2.59□□□□□ -1.99
LMNB1-207ENST00000494185 ZNF778Q96MU6 729 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 NEUROD6Q96NK8 337 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 FRG2BQ96QU4 278 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 ZNF347Q96SE7 839 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 CADM1Q9BY67 442 aaKnown RBP2.59□□□□□ -1.99
LMNB1-207ENST00000494185 CLPBQ9H078 707 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 FAM234AQ9H0X4 552 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 RBM38Q9H0Z9 239 aaKnown RBP2.59□□□□□ -1.99
LMNB1-207ENST00000494185 CATSPERBQ9H7T0 1116 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 PLEKHA2Q9HB19 425 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 MLXIPLQ9NP71 852 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 THSD1Q9NS62 852 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 BLOC1S4Q9NUP1 217 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 TMEM184CQ9NVA4 438 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.59□□□□□ -1.99
LMNB1-207ENST00000494185 TMEM160Q9NX00 188 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 GGA3Q9NZ52 723 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 CLIC5Q9NZA1 410 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 IFT80Q9P2H3 777 aaPredicted RBP2.59□□□□□ -1.99
LMNB1-207ENST00000494185 FBXO40Q9UH90 709 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 LAMP3Q9UQV4 416 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 RCE1Q9Y256 329 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 SLC45A1Q9Y2W3 748 aa2.59□□□□□ -1.99
LMNB1-207ENST00000494185 RRP7AQ9Y3A4 280 aaKnown RBP2.59□□□□□ -1.99
LMNB1-207ENST00000494185 PCSK5Q92824 1860 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 A0A087X0M5 115 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 A0A1B0GX30 115 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 ANKRD18BA2A2Z9 1011 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 C17orf102A2RUQ5 167 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 FAM90A8PA6NJQ4 464 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 A6NLC8 198 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 TTC36A6NLP5 189 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 SYN3O14994 580 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 TLX3O43711 291 aaPredicted RBP2.58□□□□□ -2
LMNB1-207ENST00000494185 GUCY1B2O75343 617 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 METTL18O95568 372 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 CRYABP02511 175 aaKnown RBP2.58□□□□□ -2
LMNB1-207ENST00000494185 POLBP06746 335 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 IFIT1P09914 478 aaKnown RBP2.58□□□□□ -2
LMNB1-207ENST00000494185 FAM90A13PP0C7W8 464 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 FAM90A24PP0C7X0 464 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 TGFB3P10600 412 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 CYP4B1P13584 511 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 ACP5P13686 325 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 PKMP14618 531 aaKnown RBP2.58□□□□□ -2
LMNB1-207ENST00000494185 PRPH2P23942 346 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 YWHAQP27348 245 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 SLC16A2P36021 539 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 ARL1P40616 181 aaPredicted RBP2.58□□□□□ -2
LMNB1-207ENST00000494185 PNPLA4P41247 253 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 CLNS1AP54105 237 aaKnown RBP2.58□□□□□ -2
LMNB1-207ENST00000494185 NAP1L1P55209 391 aaKnown RBP2.58□□□□□ -2
LMNB1-207ENST00000494185 POU5F1Q01860 360 aaKnown RBP2.58□□□□□ -2
LMNB1-207ENST00000494185 UBE3AQ05086 875 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 DSC1Q08554 894 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 TBL3Q12788 808 aaKnown RBP2.58□□□□□ -2
LMNB1-207ENST00000494185 MTX1Q13505 466 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 THOC5Q13769 683 aaKnown RBP2.58□□□□□ -2
LMNB1-207ENST00000494185 LRRC24Q50LG9 513 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 ZNF484Q5JVG2 852 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 MAP3K21Q5TCX8 1036 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 VWA5B1Q5TIE3 1220 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 PAPD7Q5XG87 772 aaKnown RBP2.58□□□□□ -2
LMNB1-207ENST00000494185 C11orf87Q6NUJ2 197 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 C16orf54Q6UWD8 224 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 BBS12Q6ZW61 710 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 MDGA2Q7Z553 956 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.58□□□□□ -2
LMNB1-207ENST00000494185 TMEM200AQ86VY9 491 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 TMC8Q8IU68 726 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 TMEM199Q8N511 208 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 SLC25A41Q8N5S1 370 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 ARL14EPQ8N8R7 260 aaPredicted RBP2.58□□□□□ -2
LMNB1-207ENST00000494185 RFFLQ8WZ73 363 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 HTRA1Q92743 480 aa2.58□□□□□ -2
LMNB1-207ENST00000494185 ZNF419Q96HQ0 510 aaPredicted RBP2.58□□□□□ -2
LMNB1-207ENST00000494185 RBM17Q96I25 401 aaKnown RBP2.58□□□□□ -2
LMNB1-207ENST00000494185 THOC3Q96J01 351 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms