RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ULBP1Q9BZM6 244 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 CEP44Q9C0F1 390 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 FAM192AQ9GZU8 254 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 MARCH2Q9P0N8 246 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 ADCY6O43306 1168 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 RECQL4O94761 1208 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 DGKAP23743 735 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 NOMO3P69849 1222 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 FAM183BPQ6ZVS7 135 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 SUSD6Q92537 303 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 UBE2E3Q969T4 207 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 CDCA5Q96FF9 252 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 CCDC167Q9P0B6 97 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 NDUFB5O43674 189 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 CATP04040 527 aaKnown RBP19.42■□□□□ 0.7
COL27A1-207ENST00000494090 NUMBP49757 651 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 ARMCX4Q5H9R4 360 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 TMEM132CQ8N3T6 1108 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 FBXO10Q9UK96 956 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 RIMS1Q86UR5 1692 aaKnown RBP19.42■□□□□ 0.7
COL27A1-207ENST00000494090 hCG_1818297A0A087WSY0 165 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 WTIPA6NIX2 430 aaPredicted RBP19.42■□□□□ 0.7
COL27A1-207ENST00000494090 USP17L7P0C7H9 530 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 SLC9A5Q14940 896 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 FNDC3BQ53EP0 1204 aaKnown RBP19.42■□□□□ 0.7
COL27A1-207ENST00000494090 ARCQ7LC44 396 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 RNF148Q8N7C7 305 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 NKX2-3Q8TAU0 364 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 ACTRT2Q8TDY3 377 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 SEMA4DQ92854 862 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 TSPAN18Q96SJ8 248 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 ADAM2Q99965 735 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 FAM237BA0A1B0GVD1 139 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 TYMPP19971 482 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 PSMB4P28070 264 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 SERPINH1P50454 418 aaKnown RBP19.42■□□□□ 0.7
COL27A1-207ENST00000494090 CELF3Q5SZQ8 465 aaKnown RBP19.42■□□□□ 0.7
COL27A1-207ENST00000494090 TRAF7Q6Q0C0 670 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 FAM126BQ8IXS8 530 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 SVOPQ8N4V2 548 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 ZNF655Q8N720 491 aaPredicted RBP19.42■□□□□ 0.7
COL27A1-207ENST00000494090 RRAGCQ9HB90 399 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 USP12O75317 370 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 SHROOM1Q2M3G4 852 aaPredicted RBP19.42■□□□□ 0.7
COL27A1-207ENST00000494090 ATP13A4Q4VNC1 1196 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 SETMARQ53H47 684 aaPredicted RBP19.42■□□□□ 0.7
COL27A1-207ENST00000494090 SETD9Q8NE22 299 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 ACMSDQ8TDX5 336 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 USP6NLQ92738 828 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 PGLYRP2Q96PD5 576 aa19.42■□□□□ 0.7
COL27A1-207ENST00000494090 SEC22BO75396 215 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 EXOC3L1Q86VI1 746 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 BBS4Q96RK4 519 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 GLIS2Q9BZE0 524 aaPredicted RBP19.41■□□□□ 0.7
COL27A1-207ENST00000494090 SLC15A5A6NIM6 579 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 TGFB1I1O43294 461 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 TBC1D12O60347 775 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 MAFO75444 373 aaPredicted RBP19.41■□□□□ 0.7
COL27A1-207ENST00000494090 PTPRAP18433 802 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 NUP62P37198 522 aaPredicted RBP19.41■□□□□ 0.7
COL27A1-207ENST00000494090 RTP1P59025 263 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 NEPROQ6NW34 567 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 AGAP11Q8TF27 550 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 SNX8Q9Y5X2 465 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 PTPN1P18031 435 aaKnown RBP19.41■□□□□ 0.7
COL27A1-207ENST00000494090 ZACNQ401N2 412 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 CCDC157Q569K6 752 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 TMEM139Q8IV31 216 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 FTHL17Q9BXU8 183 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 FAM126AQ9BYI3 521 aaPredicted RBP19.41■□□□□ 0.7
COL27A1-207ENST00000494090 OPTCQ9UBM4 332 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 KPNA5O15131 536 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 BCL10O95999 233 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 ADCYAP1R1P41586 468 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 OTUD3Q5T2D3 398 aaPredicted RBP19.41■□□□□ 0.7
COL27A1-207ENST00000494090 CYP2R1Q6VVX0 501 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 OR52K1Q8NGK4 314 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 SPPL2AQ8TCT8 520 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 MPP4Q96JB8 637 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 ZNF558Q96NG5 402 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 TINF2Q9BSI4 451 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 SNRNP25Q9BV90 132 aaKnown RBP19.41■□□□□ 0.7
COL27A1-207ENST00000494090 ACSS3Q9H6R3 686 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 MRPL17Q9NRX2 175 aaKnown RBP19.41■□□□□ 0.7
COL27A1-207ENST00000494090 MORF4L1Q9UBU8 362 aa19.41■□□□□ 0.7
COL27A1-207ENST00000494090 KPNA3O00505 521 aaPredicted RBP19.4■□□□□ 0.7
COL27A1-207ENST00000494090 PHGDHO43175 533 aaKnown RBP19.4■□□□□ 0.7
COL27A1-207ENST00000494090 GRIK3Q13003 919 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 CASP12Q6UXS9 341 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 CERS2Q96G23 380 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 KLHL3Q9UH77 587 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 CDH9Q9ULB4 789 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 BDNFP23560 247 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 CATSPERGQ6ZRH7 1159 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 IRF2BP1Q8IU81 584 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 C12orf56Q8IXR9 622 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 RASGEF1CQ8N431 466 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 USP7Q93009 1102 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 RNF145Q96MT1 663 aa19.4■□□□□ 0.7
COL27A1-207ENST00000494090 ACO2Q99798 780 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms