RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 HDAC8Q9BY41 377 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 VPS16Q9H269 839 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 DKK4Q9UBT3 224 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 IL36AQ9UHA7 158 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 KPNA3O00505 521 aaPredicted RBP12.74□□□□□ -0.37
COL6A1-205ENST00000492851 ENC1O14682 589 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 MT-CO1P00395 513 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 MMEP08473 750 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 MMP8P22894 467 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 EPHA8P29322 1005 aaPredicted RBP12.74□□□□□ -0.37
COL6A1-205ENST00000492851 SDC4P31431 198 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 HNF1BP35680 557 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 SOX5P35711 763 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 FLT3P36888 993 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 GGCXP38435 758 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 IRAK1P51617 712 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 IL9RQ01113 521 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 NRG1Q02297 640 aaPredicted RBP12.74□□□□□ -0.37
COL6A1-205ENST00000492851 SYCP1Q15431 976 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 HS1BP3Q53T59 392 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 NAA35Q5VZE5 725 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 SASS6Q6UVJ0 657 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 DCP2Q8IU60 420 aaKnown RBP12.74□□□□□ -0.37
COL6A1-205ENST00000492851 PLPP6Q8IY26 295 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 PCDH20Q8N6Y1 951 aaKnown RBP12.74□□□□□ -0.37
COL6A1-205ENST00000492851 PDCD7Q8N8D1 485 aaKnown RBP12.74□□□□□ -0.37
COL6A1-205ENST00000492851 CNDP2Q96KP4 475 aaKnown RBP12.74□□□□□ -0.37
COL6A1-205ENST00000492851 GBP4Q96PP9 640 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 PSMB7Q99436 277 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 OSBPL2Q9H1P3 480 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 TAB2Q9NYJ8 693 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 MPP6Q9NZW5 540 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 OR12D3Q9UGF7 316 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 HPCAL4Q9UM19 191 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 ZFHX4Q86UP3 3567 aa12.74□□□□□ -0.37
COL6A1-205ENST00000492851 A0A0D9SEW6 157 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 GOLGA6L22H0YM25 854 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 CBX4O00257 560 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 SNAP91O60641 907 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 GFPT2O94808 682 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 CYP1A1P04798 512 aaPredicted RBP12.73□□□□□ -0.37
COL6A1-205ENST00000492851 CCDC172P0C7W6 258 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 TFE3P19532 575 aaPredicted RBP12.73□□□□□ -0.37
COL6A1-205ENST00000492851 MAT2AP31153 395 aaKnown RBP12.73□□□□□ -0.37
COL6A1-205ENST00000492851 AKT2P31751 481 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 ADRA1BP35368 520 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 NUMBP49757 651 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 POLR2FP61218 127 aaKnown RBP12.73□□□□□ -0.37
COL6A1-205ENST00000492851 PPP2CBP62714 309 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 PPP2CAP67775 309 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 GNA12Q03113 381 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 KRT31Q15323 416 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 ARSIQ5FYB1 569 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 PRAMEF14Q5SWL7 426 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 PIP5KL1Q5T9C9 394 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 CDKAL1Q5VV42 579 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 ERN2Q76MJ5 926 aaKnown RBP12.73□□□□□ -0.37
COL6A1-205ENST00000492851 STRADAQ7RTN6 431 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 TFAP2DQ7Z6R9 452 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 FAM131BQ86XD5 332 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 GATAD2AQ86YP4 633 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 ISG20Q96AZ6 181 aaKnown RBP12.73□□□□□ -0.37
COL6A1-205ENST00000492851 LRIG1Q96JA1 1093 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 FEM1CQ96JP0 617 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 PCMTD1Q96MG8 357 aaPredicted RBP12.73□□□□□ -0.37
COL6A1-205ENST00000492851 CFAP57Q96MR6 1250 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 ATP13A1Q9HD20 1204 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 ANLNQ9NQW6 1124 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 LMBRD1Q9NUN5 540 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 ANO10Q9NW15 660 aa12.73□□□□□ -0.37
COL6A1-205ENST00000492851 NOCTQ9UK39 431 aaKnown RBP12.73□□□□□ -0.37
COL6A1-205ENST00000492851 FRYQ5TBA9 3013 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 ASPMQ8IZT6 3477 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 A0A1W2PQU0 124 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 ANKRD62A6NC57 917 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 I6L893 689 aaPredicted RBP12.72□□□□□ -0.37
COL6A1-205ENST00000492851 K7ERQ8 282 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 WNT9AO14904 365 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 RFPL3O75679 317 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 CALB1P05937 261 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 KRT3P12035 628 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 JUPP14923 745 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 RHOQP17081 205 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 DESP17661 470 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 CDK11BP21127 795 aaKnown RBP12.72□□□□□ -0.37
COL6A1-205ENST00000492851 HNRNPA2B1P22626 353 aaKnown RBP12.72□□□□□ -0.37
COL6A1-205ENST00000492851 RRM1P23921 792 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 PTPN9P43378 593 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 NSFP46459 744 aaKnown RBP12.72□□□□□ -0.37
COL6A1-205ENST00000492851 MAPKAPK2P49137 400 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 SERPINH1P50454 418 aaKnown RBP12.72□□□□□ -0.37
COL6A1-205ENST00000492851 JAM2P57087 298 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 TAS2R38P59533 333 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 ATP11AP98196 1134 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 SHBQ15464 509 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 CARD16Q5EG05 197 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 KIAA1161Q6NSJ0 714 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 PPP1R2P3Q6NXS1 205 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 C22orf39Q6P5X5 142 aa12.72□□□□□ -0.37
COL6A1-205ENST00000492851 HORMAD1Q86X24 394 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms