RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 CD4P01730 458 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 CHRM4P08173 479 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 PRR35P0CG20 571 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 KELP23276 732 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 GJC1P36383 396 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 MTNR1AP48039 350 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 GEMIN4P57678 1058 aaKnown RBP4.27□□□□□ -1.73
CLK1-213ENST00000492793 TMPRSS3P57727 454 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 NANOS3P60323 173 aaKnown RBP4.27□□□□□ -1.73
CLK1-213ENST00000492793 MPP1Q00013 466 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 EZH2Q15910 746 aaKnown RBP4.27□□□□□ -1.73
CLK1-213ENST00000492793 SLC18A3Q16572 532 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 FBXO43Q4G163 708 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 KIAA1614Q5VZ46 1190 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 GJB7Q6PEY0 223 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 ANKRD13BQ86YJ7 626 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 ARMC8Q8IUR7 673 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 DDIASQ8IXT1 998 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 TSPYL6Q8N831 410 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 SETD9Q8NE22 299 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 BCAS4Q8TDM0 211 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 FAR1Q8WVX9 515 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 HDAC2Q92769 488 aaKnown RBP4.27□□□□□ -1.73
CLK1-213ENST00000492793 ELP4Q96EB1 424 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 SIGLEC11Q96RL6 698 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 FRMD8Q9BZ67 464 aaPredicted RBP4.27□□□□□ -1.73
CLK1-213ENST00000492793 MAF1Q9H063 256 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 LMAN2LQ9H0V9 348 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 SLC25A18Q9H1K4 315 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 EPHX3Q9H6B9 360 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 ACTR5Q9H9F9 607 aaPredicted RBP4.27□□□□□ -1.73
CLK1-213ENST00000492793 PEMTQ9UBM1 199 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 OSGIN2Q9Y236 505 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 RAP2CQ9Y3L5 183 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 CYP46A1Q9Y6A2 500 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 TEX13CA0A0J9YWL9 993 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 FOXO6A8MYZ6 492 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 PRPF4O43172 522 aaKnown RBP eCLIP4.26□□□□□ -1.73
CLK1-213ENST00000492793 NEURL1O76050 574 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 TMCC1O94876 653 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 RTN3O95197 1032 aaPredicted RBP4.26□□□□□ -1.73
CLK1-213ENST00000492793 LATS1O95835 1130 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 TBX18O95935 607 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 CTSAP10619 480 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 HOXD9P28356 352 aaPredicted RBP4.26□□□□□ -1.73
CLK1-213ENST00000492793 MMP13P45452 471 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 CFHR1Q03591 330 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 SEMA3AQ14563 771 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 BAK1Q16611 211 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 PLK5Q496M5 336 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 MIDNQ504T8 468 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 ENTPD8Q5MY95 495 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 TTC39AQ5SRH9 613 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 WDR78Q5VTH9 848 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 ISM2Q6H9L7 571 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 FAM180BQ6P0A1 224 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 AAGABQ6PD74 315 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 IL20RBQ6UXL0 311 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 RRM2BQ7LG56 351 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 R3HCC1LQ7Z5L2 792 aaKnown RBP4.26□□□□□ -1.73
CLK1-213ENST00000492793 NEK8Q86SG6 692 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 WDR5BQ86VZ2 330 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 PRIMA1Q86XR5 153 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 CPXM2Q8N436 756 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 LRRC57Q8N9N7 239 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.26□□□□□ -1.73
CLK1-213ENST00000492793 ZCCHC10Q8TBK6 192 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 RAB40AQ8WXH6 277 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 CENPIQ92674 756 aaPredicted RBP4.26□□□□□ -1.73
CLK1-213ENST00000492793 EME1Q96AY2 570 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 TEFMQ96QE5 360 aaKnown RBP4.26□□□□□ -1.73
CLK1-213ENST00000492793 FUZQ9BT04 418 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 AGXT2Q9BYV1 514 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 CXorf56Q9H5V9 222 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 BEX4Q9NWD9 120 aaPredicted RBP4.26□□□□□ -1.73
CLK1-213ENST00000492793 BABAM1Q9NWV8 329 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 HDAC6Q9UBN7 1215 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 AASSQ9UDR5 926 aa4.26□□□□□ -1.73
CLK1-213ENST00000492793 ZNF335Q9H4Z2 1342 aaPredicted RBP4.25□□□□□ -1.73
CLK1-213ENST00000492793 A0A0A0MQY5 61 aa4.25□□□□□ -1.73
CLK1-213ENST00000492793 A0A1W2PPH5 198 aa4.25□□□□□ -1.73
CLK1-213ENST00000492793 WIPF3A6NGB9 483 aa4.25□□□□□ -1.73
CLK1-213ENST00000492793 DDTLA6NHG4 134 aaPredicted RBP4.25□□□□□ -1.73
CLK1-213ENST00000492793 C17orf100A8MU93 164 aa4.25□□□□□ -1.73
CLK1-213ENST00000492793 MASP2O00187 686 aa4.25□□□□□ -1.73
CLK1-213ENST00000492793 SLC25A17O43808 307 aa4.25□□□□□ -1.73
CLK1-213ENST00000492793 BCAR3O75815 825 aa4.25□□□□□ -1.73
CLK1-213ENST00000492793 DDAH2O95865 285 aa4.25□□□□□ -1.73
CLK1-213ENST00000492793 ADAP00813 363 aa4.25□□□□□ -1.73
CLK1-213ENST00000492793 URODP06132 367 aa4.25□□□□□ -1.73
CLK1-213ENST00000492793 LCKP06239 509 aa4.25□□□□□ -1.73
CLK1-213ENST00000492793 RFC1P35251 1148 aaPredicted RBP4.25□□□□□ -1.73
CLK1-213ENST00000492793 SLC16A2P36021 539 aa4.25□□□□□ -1.73
CLK1-213ENST00000492793 HARS2P49590 506 aaKnown RBP4.25□□□□□ -1.73
CLK1-213ENST00000492793 UFM1P61960 85 aa4.25□□□□□ -1.73
CLK1-213ENST00000492793 EFNB1P98172 346 aa4.25□□□□□ -1.73
CLK1-213ENST00000492793 NEXNQ0ZGT2 675 aa4.25□□□□□ -1.73
CLK1-213ENST00000492793 DAZAP2Q15038 168 aaPredicted RBP4.25□□□□□ -1.73
CLK1-213ENST00000492793 Q4G0T1 1027 aa4.25□□□□□ -1.73
CLK1-213ENST00000492793 ZNF766Q5HY98 468 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms