RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 SYN2Q92777 582 aaPredicted RBP25.25■■□□□ 1.63
UPF3A-209ENST00000492270 MYO1AQ9UBC5 1043 aa25.25■■□□□ 1.63
UPF3A-209ENST00000492270 A0A1B0GTW7 788 aa25.24■■□□□ 1.63
UPF3A-209ENST00000492270 TMEM191CA6NGB0 347 aa25.24■■□□□ 1.63
UPF3A-209ENST00000492270 ARHGAP33O14559 1287 aa25.24■■□□□ 1.63
UPF3A-209ENST00000492270 C5AR1P21730 350 aa25.24■■□□□ 1.63
UPF3A-209ENST00000492270 CASP14P31944 242 aa25.24■■□□□ 1.63
UPF3A-209ENST00000492270 MAPKAPK2P49137 400 aa25.24■■□□□ 1.63
UPF3A-209ENST00000492270 GALCP54803 685 aa25.24■■□□□ 1.63
UPF3A-209ENST00000492270 ARF5P84085 180 aa25.24■■□□□ 1.63
UPF3A-209ENST00000492270 C22orf39Q6P5X5 142 aa25.24■■□□□ 1.63
UPF3A-209ENST00000492270 ARFGAP1Q8N6T3 406 aa25.24■■□□□ 1.63
UPF3A-209ENST00000492270 RNF214Q8ND24 703 aa25.24■■□□□ 1.63
UPF3A-209ENST00000492270 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.24■■□□□ 1.63
UPF3A-209ENST00000492270 ISCUQ9H1K1 167 aa25.24■■□□□ 1.63
UPF3A-209ENST00000492270 TNKS2Q9H2K2 1166 aa25.24■■□□□ 1.63
UPF3A-209ENST00000492270 GPATCH2LQ9NWQ4 482 aa25.24■■□□□ 1.63
UPF3A-209ENST00000492270 ADAMTS1Q9UHI8 967 aa25.24■■□□□ 1.63
UPF3A-209ENST00000492270 FZD4Q9ULV1 537 aa25.24■■□□□ 1.63
UPF3A-209ENST00000492270 LUC7L2Q9Y383 392 aaKnown RBP25.24■■□□□ 1.63
UPF3A-209ENST00000492270 MCF2LO15068 1137 aa25.23■■□□□ 1.63
UPF3A-209ENST00000492270 CREB3O43889 395 aa25.23■■□□□ 1.63
UPF3A-209ENST00000492270 SERPING1P05155 500 aa25.23■■□□□ 1.63
UPF3A-209ENST00000492270 IGHV4-34P06331 123 aa25.23■■□□□ 1.63
UPF3A-209ENST00000492270 CTSLP07711 333 aa25.23■■□□□ 1.63
UPF3A-209ENST00000492270 L1CAMP32004 1257 aa25.23■■□□□ 1.63
UPF3A-209ENST00000492270 FOXK2Q01167 660 aa25.23■■□□□ 1.63
UPF3A-209ENST00000492270 NFKBIBQ15653 356 aa25.23■■□□□ 1.63
UPF3A-209ENST00000492270 DAB2IPQ5VWQ8 1189 aa25.23■■□□□ 1.63
UPF3A-209ENST00000492270 NCEH1Q6PIU2 408 aa25.23■■□□□ 1.63
UPF3A-209ENST00000492270 OR2A12Q8NGT7 310 aa25.23■■□□□ 1.63
UPF3A-209ENST00000492270 PEBP4Q96S96 227 aa25.23■■□□□ 1.63
UPF3A-209ENST00000492270 PPM1HQ9ULR3 514 aa25.23■■□□□ 1.63
UPF3A-209ENST00000492270 RNF103O00237 685 aa25.22■■□□□ 1.63
UPF3A-209ENST00000492270 ALOX15BO15296 676 aa25.22■■□□□ 1.63
UPF3A-209ENST00000492270 BCAT2O15382 392 aaPredicted RBP25.22■■□□□ 1.63
UPF3A-209ENST00000492270 GOT1P17174 413 aa25.22■■□□□ 1.63
UPF3A-209ENST00000492270 EPHB2P29323 1055 aa25.22■■□□□ 1.63
UPF3A-209ENST00000492270 ATXN3P54252 364 aaPredicted RBP25.22■■□□□ 1.63
UPF3A-209ENST00000492270 ADPRHP54922 357 aa25.22■■□□□ 1.63
UPF3A-209ENST00000492270 SFSWAPQ12872 951 aaKnown RBP25.22■■□□□ 1.63
UPF3A-209ENST00000492270 GRIK2Q13002 908 aa25.22■■□□□ 1.63
UPF3A-209ENST00000492270 SEMA3BQ13214 749 aa25.22■■□□□ 1.63
UPF3A-209ENST00000492270 KIAA0895LQ68EN5 471 aa25.22■■□□□ 1.63
UPF3A-209ENST00000492270 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.22■■□□□ 1.63
UPF3A-209ENST00000492270 DSG4Q86SJ6 1040 aa25.22■■□□□ 1.63
UPF3A-209ENST00000492270 MINDY1Q8N5J2 469 aa25.22■■□□□ 1.63
UPF3A-209ENST00000492270 CHST14Q8NCH0 376 aa25.22■■□□□ 1.63
UPF3A-209ENST00000492270 PIP4K2CQ8TBX8 421 aa25.22■■□□□ 1.63
UPF3A-209ENST00000492270 ARHGEF2Q92974 986 aaKnown RBP25.22■■□□□ 1.63
UPF3A-209ENST00000492270 IQCDQ96DY2 449 aa25.22■■□□□ 1.63
UPF3A-209ENST00000492270 ACE2Q9BYF1 805 aaPredicted RBP25.22■■□□□ 1.63
UPF3A-209ENST00000492270 BZW2Q9Y6E2 419 aaKnown RBP25.22■■□□□ 1.63
UPF3A-209ENST00000492270 NCOR2Q9Y618 2525 aa25.22■■□□□ 1.63
UPF3A-209ENST00000492270 ZNF821O75541 412 aaPredicted RBP25.21■■□□□ 1.63
UPF3A-209ENST00000492270 CD160O95971 181 aa25.21■■□□□ 1.63
UPF3A-209ENST00000492270 DESP17661 470 aa25.21■■□□□ 1.63
UPF3A-209ENST00000492270 SERPINH1P50454 418 aaKnown RBP25.21■■□□□ 1.63
UPF3A-209ENST00000492270 CLCN6P51797 869 aa25.21■■□□□ 1.63
UPF3A-209ENST00000492270 BNC1Q01954 994 aa25.21■■□□□ 1.63
UPF3A-209ENST00000492270 CA9Q16790 459 aa25.21■■□□□ 1.63
UPF3A-209ENST00000492270 RETSATQ6NUM9 610 aa25.21■■□□□ 1.63
UPF3A-209ENST00000492270 OR14C36Q8NHC7 312 aa25.21■■□□□ 1.63
UPF3A-209ENST00000492270 ORAI3Q9BRQ5 295 aa25.21■■□□□ 1.63
UPF3A-209ENST00000492270 NOL6Q9H6R4 1146 aaKnown RBP25.21■■□□□ 1.63
UPF3A-209ENST00000492270 PCSK1NQ9UHG2 260 aa25.21■■□□□ 1.63
UPF3A-209ENST00000492270 FCF1Q9Y324 198 aaKnown RBP25.21■■□□□ 1.63
UPF3A-209ENST00000492270 SCINQ9Y6U3 715 aa25.21■■□□□ 1.63
UPF3A-209ENST00000492270 A0A087X0T9 212 aa25.2■■□□□ 1.62
UPF3A-209ENST00000492270 SYPP08247 313 aa25.2■■□□□ 1.62
UPF3A-209ENST00000492270 FAM228BP0C875 321 aa25.2■■□□□ 1.62
UPF3A-209ENST00000492270 AIF1P55008 147 aa25.2■■□□□ 1.62
UPF3A-209ENST00000492270 CNTN1Q12860 1018 aa25.2■■□□□ 1.62
UPF3A-209ENST00000492270 LAYNQ6UX15 382 aa25.2■■□□□ 1.62
UPF3A-209ENST00000492270 LEKR1Q6ZMV7 388 aa25.2■■□□□ 1.62
UPF3A-209ENST00000492270 RTL3Q8N8U3 475 aaKnown RBP25.2■■□□□ 1.62
UPF3A-209ENST00000492270 OR2T34Q8NGX1 318 aa25.2■■□□□ 1.62
UPF3A-209ENST00000492270 FAM131CQ96AQ9 280 aa25.2■■□□□ 1.62
UPF3A-209ENST00000492270 TRIM11Q96F44 468 aa25.2■■□□□ 1.62
UPF3A-209ENST00000492270 EPAS1Q99814 870 aa25.2■■□□□ 1.62
UPF3A-209ENST00000492270 MAGEH1Q9H213 219 aa25.2■■□□□ 1.62
UPF3A-209ENST00000492270 RETREG1Q9H6L5 497 aa25.2■■□□□ 1.62
UPF3A-209ENST00000492270 EBF2Q9HAK2 575 aa25.2■■□□□ 1.62
UPF3A-209ENST00000492270 ARHGAP20Q9P2F6 1191 aa25.2■■□□□ 1.62
UPF3A-209ENST00000492270 AP4E1Q9UPM8 1137 aa25.2■■□□□ 1.62
UPF3A-209ENST00000492270 LRRC72A6NJI9 287 aa25.19■■□□□ 1.62
UPF3A-209ENST00000492270 C10orf142B7Z368 130 aa25.19■■□□□ 1.62
UPF3A-209ENST00000492270 C1QTNF3-AMACRE9PGA6 284 aa25.19■■□□□ 1.62
UPF3A-209ENST00000492270 RAMP2O60895 175 aa25.19■■□□□ 1.62
UPF3A-209ENST00000492270 KCNK5O95279 499 aa25.19■■□□□ 1.62
UPF3A-209ENST00000492270 TPM3P06753 285 aa25.19■■□□□ 1.62
UPF3A-209ENST00000492270 MYBL1P10243 752 aa25.19■■□□□ 1.62
UPF3A-209ENST00000492270 CD27P26842 260 aa25.19■■□□□ 1.62
UPF3A-209ENST00000492270 CHRNA3P32297 505 aa25.19■■□□□ 1.62
UPF3A-209ENST00000492270 CSNK1EP49674 416 aaKnown RBP25.19■■□□□ 1.62
UPF3A-209ENST00000492270 FAM46CQ5VWP2 391 aa25.19■■□□□ 1.62
UPF3A-209ENST00000492270 DPY19L3Q6ZPD9 716 aa25.19■■□□□ 1.62
UPF3A-209ENST00000492270 CYP4V2Q6ZWL3 525 aaPredicted RBP25.19■■□□□ 1.62
UPF3A-209ENST00000492270 FNIP1Q8TF40 1166 aa25.19■■□□□ 1.62
UPF3A-209ENST00000492270 CCDC114Q96M63 670 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms