RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 SLC5A2P31639 672 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 DRD3P35462 400 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 METAP1P53582 386 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 ECT2LQ008S8 904 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 DNM1Q05193 864 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 DPYDQ12882 1025 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 OVGP1Q12889 678 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 CBWD6Q4V339 395 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 DCAF6Q58WW2 860 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 MS4A13Q5J8X5 152 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 CBWD3Q5JTY5 395 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 CBWD5Q5RIA9 395 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 NAPEPLDQ6IQ20 393 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 PMF1Q6P1K2 205 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 LCLAT1Q6UWP7 414 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 APCDD1Q8J025 514 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 CFAP52Q8N1V2 620 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 GALNT11Q8NCW6 608 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 TPCN2Q8NHX9 752 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 IRGQQ8WZA9 623 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 TFAP2BQ92481 460 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 PTPRN2Q92932 1015 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 FAM131CQ96AQ9 280 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 RPL10LQ96L21 214 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 ZSWIM1Q9BR11 485 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 NUCKS1Q9H1E3 243 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 WDR70Q9NW82 654 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 COQ4Q9Y3A0 265 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 RP1P56715 2156 aa12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 TDRD6O60522 2096 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-228ENST00000492150 TBC1D3DA0A087WVF3 549 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 TBC1D3IA0A087WXS9 549 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 TBC1D3EA0A087X179 549 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 TBC1D3KA0A087X1G2 549 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 LY6G6EA0A0G2JKS1 128 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 TBC1D3FA6NER0 549 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 TBC1D3LB9A6J9 549 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 STX10O60499 249 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 RTN2O75298 545 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 VPS4BO75351 444 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 LUC7L3O95232 432 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 PRKCGP05129 697 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 FYNP06241 537 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 TBC1D3HP0C7X1 549 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 GIMD1P0DJR0 217 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 VAV1P15498 845 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 MZF1P28698 734 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 STK19P49842 368 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 CYP4F2P78329 520 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 EIF3IQ13347 325 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 CDH18Q13634 790 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 EDRF1Q3B7T1 1238 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 TBC1D3GQ6DHY5 549 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 TBC1D3CQ6IPX1 549 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 TMC6Q7Z403 805 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 TBC1D3Q8IZP1 549 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 C9orf43Q8TAL5 461 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 DQX1Q8TE96 717 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 SLC39A13Q96H72 371 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 APOLD1Q96LR9 279 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 DDX50Q9BQ39 737 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 OSBPL2Q9H1P3 480 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 CYTH4Q9UIA0 394 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 CFAP45Q9UL16 551 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 KIAA1257Q9ULG3 409 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 VPS4AQ9UN37 437 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 U3KQA8 63 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 DOCK9Q9BZ29 2069 aa12.05□□□□□ -0.48
CACNA1C-228ENST00000492150 PCSK5Q92824 1860 aa12.04□□□□□ -0.48
CACNA1C-228ENST00000492150 TYW5A2RUC4 315 aaKnown RBP12.04□□□□□ -0.48
CACNA1C-228ENST00000492150 SDC3O75056 442 aa12.04□□□□□ -0.48
CACNA1C-228ENST00000492150 IL1BP01584 269 aa12.04□□□□□ -0.48
CACNA1C-228ENST00000492150 KRT7P08729 469 aa12.04□□□□□ -0.48
CACNA1C-228ENST00000492150 ALPPL2P10696 532 aa12.04□□□□□ -0.48
CACNA1C-228ENST00000492150 WT1P19544 449 aaPredicted RBP12.04□□□□□ -0.48
CACNA1C-228ENST00000492150 DGKAP23743 735 aa12.04□□□□□ -0.48
CACNA1C-228ENST00000492150 MAT2AP31153 395 aaKnown RBP12.04□□□□□ -0.48
CACNA1C-228ENST00000492150 YWHAEP62258 255 aaKnown RBP12.04□□□□□ -0.48
CACNA1C-228ENST00000492150 PKP1Q13835 747 aa12.04□□□□□ -0.48
CACNA1C-228ENST00000492150 FOXR1Q6PIV2 292 aa12.04□□□□□ -0.48
CACNA1C-228ENST00000492150 PRPF39Q86UA1 669 aaKnown RBP12.04□□□□□ -0.48
CACNA1C-228ENST00000492150 IFI44Q8TCB0 444 aa12.04□□□□□ -0.48
CACNA1C-228ENST00000492150 CCDC47Q96A33 483 aaKnown RBP12.04□□□□□ -0.48
CACNA1C-228ENST00000492150 SLC12A9Q9BXP2 914 aa12.04□□□□□ -0.48
CACNA1C-228ENST00000492150 NLGN3Q9NZ94 848 aa12.04□□□□□ -0.48
CACNA1C-228ENST00000492150 XPO7Q9UIA9 1087 aaKnown RBP12.04□□□□□ -0.48
CACNA1C-228ENST00000492150 SARDHQ9UL12 918 aa12.04□□□□□ -0.48
CACNA1C-228ENST00000492150 TLR6Q9Y2C9 796 aa12.04□□□□□ -0.48
CACNA1C-228ENST00000492150 FAM237AA0A1B0GTK4 181 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 RNF225M0QZC1 329 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 CETN3O15182 167 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 NVLO15381 856 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 PLRG1O43660 514 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 MOCS3O95396 460 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 MOCS2O96007 188 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 CALCAP01258 141 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 PAEPP09466 180 aa12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 EPB41P11171 864 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-228ENST00000492150 GNLYP22749 145 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms