RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 AGBL4Q5VU57 503 aa18.43■□□□□ 0.54
HMGN1-219ENST00000491183 FAM46CQ5VWP2 391 aa18.43■□□□□ 0.54
HMGN1-219ENST00000491183 TBC1D3GQ6DHY5 549 aa18.43■□□□□ 0.54
HMGN1-219ENST00000491183 TBC1D3CQ6IPX1 549 aa18.43■□□□□ 0.54
HMGN1-219ENST00000491183 STRADAQ7RTN6 431 aa18.43■□□□□ 0.54
HMGN1-219ENST00000491183 ADAT2Q7Z6V5 191 aaKnown RBP18.43■□□□□ 0.54
HMGN1-219ENST00000491183 GLRX5Q86SX6 157 aa18.43■□□□□ 0.54
HMGN1-219ENST00000491183 TBC1D3Q8IZP1 549 aaPredicted RBP18.43■□□□□ 0.54
HMGN1-219ENST00000491183 CHCHD4Q8N4Q1 142 aa18.43■□□□□ 0.54
HMGN1-219ENST00000491183 BAHD1Q8TBE0 780 aaPredicted RBP18.43■□□□□ 0.54
HMGN1-219ENST00000491183 AGPAT1Q99943 283 aa18.43■□□□□ 0.54
HMGN1-219ENST00000491183 KDM4CQ9H3R0 1056 aa18.43■□□□□ 0.54
HMGN1-219ENST00000491183 ARHGAP20Q9P2F6 1191 aa18.43■□□□□ 0.54
HMGN1-219ENST00000491183 PPARGC1AQ9UBK2 798 aaKnown RBP18.43■□□□□ 0.54
HMGN1-219ENST00000491183 KLK13Q9UKR3 277 aa18.43■□□□□ 0.54
HMGN1-219ENST00000491183 BTBD3Q9Y2F9 522 aa18.43■□□□□ 0.54
HMGN1-219ENST00000491183 EPG5Q9HCE0 2579 aa18.43■□□□□ 0.54
HMGN1-219ENST00000491183 KMT2BQ9UMN6 2715 aaPredicted RBP18.42■□□□□ 0.54
HMGN1-219ENST00000491183 TCRBV5S1A1TA0A578 114 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 C1QTNF3-AMACRE9PGA6 284 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 FAM72CH0Y354 149 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 SLC7A4O43246 635 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 PLRG1O43660 514 aaKnown RBP18.42■□□□□ 0.54
HMGN1-219ENST00000491183 TRIM16O95361 564 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 PROS1P07225 676 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 KRT3P12035 628 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 NSFP46459 744 aaKnown RBP18.42■□□□□ 0.54
HMGN1-219ENST00000491183 HDAC4P56524 1084 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 NRG1Q02297 640 aaPredicted RBP18.42■□□□□ 0.54
HMGN1-219ENST00000491183 ANO6Q4KMQ2 910 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 PRAMEF14Q5SWL7 426 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 FAM72AQ5TYM5 149 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 FAM72DQ6L9T8 149 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 WDR59Q6PJI9 974 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 UNQ6494/PRO21346Q6UXR6 183 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 ZNF783Q6ZMS7 281 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 MON1BQ7L1V2 547 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 RAB44Q7Z6P3 723 aaPredicted RBP18.42■□□□□ 0.54
HMGN1-219ENST00000491183 SLCO6A1Q86UG4 719 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 FAM72BQ86X60 149 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 PNPLA1Q8N8W4 532 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 CHST14Q8NCH0 376 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 RHBDD1Q8TEB9 315 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 GATA6Q92908 595 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 SPON2Q9BUD6 331 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 ACE2Q9BYF1 805 aaPredicted RBP18.42■□□□□ 0.54
HMGN1-219ENST00000491183 OSBPL2Q9H1P3 480 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 NDFIP2Q9NV92 336 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 OR12D3Q9UGF7 316 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 NEUROG3Q9Y4Z2 214 aa18.42■□□□□ 0.54
HMGN1-219ENST00000491183 SIGLEC16A6NMB1 481 aa18.41■□□□□ 0.54
HMGN1-219ENST00000491183 CBX4O00257 560 aa18.41■□□□□ 0.54
HMGN1-219ENST00000491183 FLRT2O43155 660 aa18.41■□□□□ 0.54
HMGN1-219ENST00000491183 ZNF821O75541 412 aaPredicted RBP18.41■□□□□ 0.54
HMGN1-219ENST00000491183 FTH1P19P0C7X4 201 aa18.41■□□□□ 0.54
HMGN1-219ENST00000491183 CD38P28907 300 aa18.41■□□□□ 0.54
HMGN1-219ENST00000491183 CHRNA3P32297 505 aa18.41■□□□□ 0.54
HMGN1-219ENST00000491183 C21orf59P57076 290 aa18.41■□□□□ 0.54
HMGN1-219ENST00000491183 TAS2R38P59533 333 aa18.41■□□□□ 0.54
HMGN1-219ENST00000491183 GNA12Q03113 381 aa18.41■□□□□ 0.54
HMGN1-219ENST00000491183 ARL13BQ3SXY8 428 aa18.41■□□□□ 0.54
HMGN1-219ENST00000491183 IRF2BP2Q7Z5L9 587 aa18.41■□□□□ 0.54
HMGN1-219ENST00000491183 DRC7Q8IY82 874 aa18.41■□□□□ 0.54
HMGN1-219ENST00000491183 CCDC185Q8N715 623 aa18.41■□□□□ 0.54
HMGN1-219ENST00000491183 C3orf20Q8ND61 904 aa18.41■□□□□ 0.54
HMGN1-219ENST00000491183 FAM172AQ8WUF8 416 aa18.41■□□□□ 0.54
HMGN1-219ENST00000491183 BPIFA3Q9BQP9 254 aa18.41■□□□□ 0.54
HMGN1-219ENST00000491183 SELENOOQ9BVL4 669 aa18.41■□□□□ 0.54
HMGN1-219ENST00000491183 TNKS2Q9H2K2 1166 aa18.41■□□□□ 0.54
HMGN1-219ENST00000491183 RTN4Q9NQC3 1192 aaKnown RBP18.41■□□□□ 0.54
HMGN1-219ENST00000491183 AASDHPPTQ9NRN7 309 aa18.41■□□□□ 0.54
HMGN1-219ENST00000491183 CHD5Q8TDI0 1954 aa18.41■□□□□ 0.54
HMGN1-219ENST00000491183 FAM221BA6H8Z2 402 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 PCDHGA12O60330 932 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 CD160O95971 181 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 CALB1P05937 261 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 GPD1P21695 349 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 CLCN6P51797 869 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 ARF5P84085 180 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 SUZ12Q15022 739 aaKnown RBP18.4■□□□□ 0.54
HMGN1-219ENST00000491183 PIP5KL1Q5T9C9 394 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 C22orf39Q6P5X5 142 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 NLRP14Q86W24 1093 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 TMIEQ8NEW7 156 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 ADAMTS14Q8WXS8 1223 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 ARRDC3Q96B67 414 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 SERAC1Q96JX3 654 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 SYT11Q9BT88 431 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 ATP13A1Q9HD20 1204 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 SEPT11Q9NVA2 429 aaKnown RBP18.4■□□□□ 0.54
HMGN1-219ENST00000491183 TOR4AQ9NXH8 423 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 TPX2Q9ULW0 747 aaKnown RBP18.4■□□□□ 0.54
HMGN1-219ENST00000491183 NEU3Q9UQ49 428 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 MSRB2Q9Y3D2 182 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 FARP1Q9Y4F1 1045 aaPredicted RBP18.4■□□□□ 0.54
HMGN1-219ENST00000491183 ACTL7AQ9Y615 435 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 CACNA1BQ00975 2339 aa18.4■□□□□ 0.54
HMGN1-219ENST00000491183 FRYQ5TBA9 3013 aa18.39■□□□□ 0.54
HMGN1-219ENST00000491183 A0A1B0GTQ1 180 aa18.39■□□□□ 0.53
HMGN1-219ENST00000491183 LRIG2O94898 1065 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms