RNA–Protein interactions for RNA: ENST00000490417.6

SFXN4-208, Transcript of sideroflexin 4, human

TSL 2

Gene SFXN4, Length 952 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFXN4-208	ENST00000490417	AFF3	P51826	1226 aa	Known RBP	13.92	□□□□□ -0.18
SFXN4-208	ENST00000490417	DLG2	Q15700	870 aa		13.92	□□□□□ -0.18
SFXN4-208	ENST00000490417	ALF	Q53S48	1182 aa		13.92	□□□□□ -0.18
SFXN4-208	ENST00000490417	TDRD12	Q587J7	1177 aa	Known RBP	13.92	□□□□□ -0.18
SFXN4-208	ENST00000490417	TFAP2D	Q7Z6R9	452 aa		13.92	□□□□□ -0.18
SFXN4-208	ENST00000490417	SH2D3C	Q8N5H7	860 aa		13.92	□□□□□ -0.18
SFXN4-208	ENST00000490417	JOSD2	Q8TAC2	188 aa		13.92	□□□□□ -0.18
SFXN4-208	ENST00000490417	PTPRN2	Q92932	1015 aa		13.92	□□□□□ -0.18
SFXN4-208	ENST00000490417	EIF3C	Q99613	913 aa	Known RBP	13.92	□□□□□ -0.18
SFXN4-208	ENST00000490417	SPON2	Q9BUD6	331 aa		13.92	□□□□□ -0.18
SFXN4-208	ENST00000490417	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
SFXN4-208	ENST00000490417	GTPBP2	Q9BX10	602 aa	Known RBP	13.92	□□□□□ -0.18
SFXN4-208	ENST00000490417	CATSPERB	Q9H7T0	1116 aa		13.92	□□□□□ -0.18
SFXN4-208	ENST00000490417	ATP13A1	Q9HD20	1204 aa		13.92	□□□□□ -0.18
SFXN4-208	ENST00000490417	DYRK4	Q9NR20	520 aa		13.92	□□□□□ -0.18
SFXN4-208	ENST00000490417	MPP6	Q9NZW5	540 aa		13.92	□□□□□ -0.18
SFXN4-208	ENST00000490417	HS3ST2	Q9Y278	367 aa		13.92	□□□□□ -0.18
SFXN4-208	ENST00000490417	NUP205	Q92621	2012 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	ATXN2	Q99700	1313 aa	Known RBP	13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	TMCO5B	A8MYB1	307 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	PATE3	B3GLJ2	98 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	CBX4	O00257	560 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	MCF2L	O15068	1137 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	MID1	O15344	667 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	FTL	P02792	175 aa	Predicted RBP	13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	GOT1	P17174	413 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	RRM1	P23921	792 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	PSMA2	P25787	234 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	PSMD8	P48556	350 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	STK19	P49842	368 aa	Predicted RBP	13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	ZBED6	P86452	979 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	GNA12	Q03113	381 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	SCAP	Q12770	1279 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	SLC14A1	Q13336	389 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	HNRNPD	Q14103	355 aa	Known RBP	13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	TUSC1	Q2TAM9	212 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	UAP1L1	Q3KQV9	507 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	PPM1J	Q5JR12	505 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	TRNP1	Q6NT89	227 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	PPP1R16A	Q96I34	528 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	CEP44	Q9C0F1	390 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	MAGEH1	Q9H213	219 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	OSGEP	Q9NPF4	335 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	ADAMTS1	Q9UHI8	967 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	OR51B4	Q9Y5P0	310 aa		13.91	□□□□□ -0.18
SFXN4-208	ENST00000490417	DMXL1	Q9Y485	3027 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	CACNA1A	O00555	2505 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417		A0A1W2PP55	124 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	FGF10	O15520	208 aa	Predicted RBP	13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	BNIP3L	O60238	219 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	RAMP2	O60895	175 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	FSBP	O95073	299 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	CER1	O95813	267 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	PRNP	P04156	253 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	SERPING1	P05155	500 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	CD27	P26842	260 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	L1CAM	P32004	1257 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	ACSL1	P33121	698 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	NUDT1	P36639	197 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	MAPK8	P45983	427 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	ZNF135	P52742	658 aa	Predicted RBP	13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	HDAC4	P56524	1084 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	MAMLD1	Q13495	774 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	TRIM14	Q14142	442 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	SLC45A4	Q5BKX6	768 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	TMC6	Q7Z403	805 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	ADAT2	Q7Z6V5	191 aa	Known RBP	13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	ZNF354C	Q86Y25	554 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	ZNF683	Q8IZ20	524 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	STK40	Q8N2I9	435 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	OR2T34	Q8NGX1	318 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	OR14C36	Q8NHC7	312 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	FNIP1	Q8TF40	1166 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	FRS2	Q8WU20	508 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	ALG14	Q96F25	216 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	FAM129B	Q96TA1	746 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	TTYH3	Q9C0H2	523 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	TSPY26P	Q9H489	355 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	CAPN10	Q9HC96	672 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	CD93	Q9NPY3	652 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	ANLN	Q9NQW6	1124 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	TMEM248	Q9NWD8	314 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	CNOT8	Q9UFF9	292 aa	Known RBP	13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	EIF2B4	Q9UI10	523 aa	Known RBP	13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	VPS51	Q9UID3	782 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	CAPN11	Q9UMQ6	739 aa		13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.9	□□□□□ -0.18
SFXN4-208	ENST00000490417	TBC1D3D	A0A087WVF3	549 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	TBC1D3I	A0A087WXS9	549 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	TBC1D3E	A0A087X179	549 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	TBC1D3K	A0A087X1G2	549 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	FAM47DP	A6NHR8	397 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	TBC1D3L	B9A6J9	549 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	CCP110	O43303	1012 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	LRIG2	O94898	1065 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	TBC1D3H	P0C7X1	549 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	SRC	P12931	536 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms