RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 KIAA1211LQ6NV74 962 aa17.09■□□□□ 0.33
SFXN5-220ENST00000490056 SH2D3CQ8N5H7 860 aa17.09■□□□□ 0.33
SFXN5-220ENST00000490056 GABRG3Q99928 467 aa17.09■□□□□ 0.33
SFXN5-220ENST00000490056 OSBPL8Q9BZF1 889 aa17.09■□□□□ 0.33
SFXN5-220ENST00000490056 DTLQ9NZJ0 730 aa17.09■□□□□ 0.33
SFXN5-220ENST00000490056 SAE1Q9UBE0 346 aaPredicted RBP17.09■□□□□ 0.33
SFXN5-220ENST00000490056 HEY1Q9Y5J3 304 aa17.09■□□□□ 0.33
SFXN5-220ENST00000490056 CACNA1IQ9P0X4 2223 aa17.08■□□□□ 0.33
SFXN5-220ENST00000490056 A0A1W2PQF6 199 aa17.08■□□□□ 0.32
SFXN5-220ENST00000490056 NPC1O15118 1278 aa17.08■□□□□ 0.32
SFXN5-220ENST00000490056 PRAMEF11O60813 436 aa17.08■□□□□ 0.32
SFXN5-220ENST00000490056 EPHX1P07099 455 aa17.08■□□□□ 0.32
SFXN5-220ENST00000490056 HOXB2P14652 356 aa17.08■□□□□ 0.32
SFXN5-220ENST00000490056 VAV1P15498 845 aa17.08■□□□□ 0.32
SFXN5-220ENST00000490056 ZFXP17010 805 aaPredicted RBP17.08■□□□□ 0.32
SFXN5-220ENST00000490056 NNMTP40261 264 aa17.08■□□□□ 0.32
SFXN5-220ENST00000490056 CXCL12P48061 93 aa17.08■□□□□ 0.32
SFXN5-220ENST00000490056 TFDP2Q14188 446 aa17.08■□□□□ 0.32
SFXN5-220ENST00000490056 E2F5Q15329 346 aa17.08■□□□□ 0.32
SFXN5-220ENST00000490056 DLG2Q15700 870 aa17.08■□□□□ 0.32
SFXN5-220ENST00000490056 RETSATQ6NUM9 610 aa17.08■□□□□ 0.32
SFXN5-220ENST00000490056 SYT13Q7L8C5 426 aa17.08■□□□□ 0.32
SFXN5-220ENST00000490056 ATP11CQ8NB49 1132 aa17.08■□□□□ 0.32
SFXN5-220ENST00000490056 HAUS1Q96CS2 278 aa17.08■□□□□ 0.32
SFXN5-220ENST00000490056 KCND1Q9NSA2 647 aa17.08■□□□□ 0.32
SFXN5-220ENST00000490056 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.08■□□□□ 0.32
SFXN5-220ENST00000490056 IPO11Q9UI26 975 aaKnown RBP17.08■□□□□ 0.32
SFXN5-220ENST00000490056 HS3ST2Q9Y278 367 aa17.08■□□□□ 0.32
SFXN5-220ENST00000490056 KMT2EQ8IZD2 1858 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 KCNK3O14649 394 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 ATP9BO43861 1147 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 PECAM1P16284 738 aaPredicted RBP17.07■□□□□ 0.32
SFXN5-220ENST00000490056 PTPN7P35236 360 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 CETN2P41208 172 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 SERPINH1P50454 418 aaKnown RBP17.07■□□□□ 0.32
SFXN5-220ENST00000490056 SLC20A2Q08357 652 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 GALNT2Q10471 571 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 CRY1Q16526 586 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 HNRNPA1L2Q32P51 320 aaKnown RBP17.07■□□□□ 0.32
SFXN5-220ENST00000490056 BBS12Q6ZW61 710 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 B4GALNT4Q76KP1 1039 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 C1orf210Q8IVY1 113 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 ATPAF2Q8N5M1 289 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 KDM1BQ8NB78 822 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 FRS2Q8WU20 508 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 UBE2Q2Q8WVN8 375 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 TRIM44Q96DX7 344 aaPredicted RBP17.07■□□□□ 0.32
SFXN5-220ENST00000490056 HHIPQ96QV1 700 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 IER2Q9BTL4 223 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 PRDM16Q9HAZ2 1276 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 SP110Q9HB58 689 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 PDFQ9HBH1 243 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 SUN2Q9UH99 717 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 SLC8A2Q9UPR5 921 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 FCF1Q9Y324 198 aaKnown RBP17.07■□□□□ 0.32
SFXN5-220ENST00000490056 JRKLQ9Y4A0 524 aa17.07■□□□□ 0.32
SFXN5-220ENST00000490056 SHROOM3Q8TF72 1996 aa17.06■□□□□ 0.32
SFXN5-220ENST00000490056 LAMTOR5O43504 91 aa17.06■□□□□ 0.32
SFXN5-220ENST00000490056 BNIP3LO60238 219 aa17.06■□□□□ 0.32
SFXN5-220ENST00000490056 MAFKO60675 156 aa17.06■□□□□ 0.32
SFXN5-220ENST00000490056 SIN3BO75182 1162 aa17.06■□□□□ 0.32
SFXN5-220ENST00000490056 ATP1A1P05023 1023 aaKnown RBP17.06■□□□□ 0.32
SFXN5-220ENST00000490056 CXCR5P32302 372 aa17.06■□□□□ 0.32
SFXN5-220ENST00000490056 GARSP41250 739 aaKnown RBP17.06■□□□□ 0.32
SFXN5-220ENST00000490056 VASPP50552 380 aaPredicted RBP17.06■□□□□ 0.32
SFXN5-220ENST00000490056 CCR3P51677 355 aa17.06■□□□□ 0.32
SFXN5-220ENST00000490056 GNG11P61952 73 aa17.06■□□□□ 0.32
SFXN5-220ENST00000490056 IL10RBQ08334 325 aa17.06■□□□□ 0.32
SFXN5-220ENST00000490056 HS1BP3Q53T59 392 aa17.06■□□□□ 0.32
SFXN5-220ENST00000490056 TSSK4Q6SA08 328 aa17.06■□□□□ 0.32
SFXN5-220ENST00000490056 MAMSTRQ6ZN01 415 aa17.06■□□□□ 0.32
SFXN5-220ENST00000490056 Q6ZVU0 165 aa17.06■□□□□ 0.32
SFXN5-220ENST00000490056 MAML2Q8IZL2 1156 aaPredicted RBP17.06■□□□□ 0.32
SFXN5-220ENST00000490056 PTPRN2Q92932 1015 aa17.06■□□□□ 0.32
SFXN5-220ENST00000490056 WDR24Q96S15 920 aa17.06■□□□□ 0.32
SFXN5-220ENST00000490056 TNKS2Q9H2K2 1166 aa17.06■□□□□ 0.32
SFXN5-220ENST00000490056 CD248Q9HCU0 757 aa17.06■□□□□ 0.32
SFXN5-220ENST00000490056 PRSS16Q9NQE7 514 aa17.06■□□□□ 0.32
SFXN5-220ENST00000490056 UBA2Q9UBT2 640 aaPredicted RBP17.06■□□□□ 0.32
SFXN5-220ENST00000490056 EDDM13A0A1B0GTR0 161 aa17.05■□□□□ 0.32
SFXN5-220ENST00000490056 TCRBV7S2A1N4TA0A589 114 aa17.05■□□□□ 0.32
SFXN5-220ENST00000490056 ZSCAN5CA6NGD5 496 aaPredicted RBP17.05■□□□□ 0.32
SFXN5-220ENST00000490056 K7ESF4 209 aa17.05■□□□□ 0.32
SFXN5-220ENST00000490056 SYNCRIPO60506 623 aaKnown RBP17.05■□□□□ 0.32
SFXN5-220ENST00000490056 ZNF821O75541 412 aaPredicted RBP17.05■□□□□ 0.32
SFXN5-220ENST00000490056 TMCC1O94876 653 aa17.05■□□□□ 0.32
SFXN5-220ENST00000490056 TGM2P21980 687 aa17.05■□□□□ 0.32
SFXN5-220ENST00000490056 PXNP49023 591 aaPredicted RBP17.05■□□□□ 0.32
SFXN5-220ENST00000490056 GEMIN4P57678 1058 aaKnown RBP17.05■□□□□ 0.32
SFXN5-220ENST00000490056 CAMK2GQ13555 558 aaPredicted RBP17.05■□□□□ 0.32
SFXN5-220ENST00000490056 STARD3Q14849 445 aa17.05■□□□□ 0.32
SFXN5-220ENST00000490056 CYTH1Q15438 398 aa17.05■□□□□ 0.32
SFXN5-220ENST00000490056 FAM182AQ5T1J6 154 aa17.05■□□□□ 0.32
SFXN5-220ENST00000490056 C9orf64Q5T6V5 341 aa17.05■□□□□ 0.32
SFXN5-220ENST00000490056 SEL1L2Q5TEA6 688 aa17.05■□□□□ 0.32
SFXN5-220ENST00000490056 CCDC181Q5TID7 509 aa17.05■□□□□ 0.32
SFXN5-220ENST00000490056 C22orf39Q6P5X5 142 aa17.05■□□□□ 0.32
SFXN5-220ENST00000490056 CCNYQ8ND76 341 aa17.05■□□□□ 0.32
SFXN5-220ENST00000490056 LGMNQ99538 433 aa17.05■□□□□ 0.32
SFXN5-220ENST00000490056 FAM118BQ9BPY3 351 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms