RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, human

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAMP4-208	ENST00000489554	MIP	P30301	263 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	CTNNA1	P35221	906 aa	Known RBP	10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	SLC1A1	P43005	524 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	CXCR3	P49682	368 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	TPMT	P51580	245 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	NAP1L1	P55209	391 aa	Known RBP	10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	GNG11	P61952	73 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	PLEKHG6	Q3KR16	790 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	ATP13A4	Q4VNC1	1196 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	FSCB	Q5H9T9	825 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	PPM1J	Q5JR12	505 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	PITRM1	Q5JRX3	1037 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	WDR45B	Q5MNZ6	344 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	BRMS1L	Q5PSV4	323 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	ACBD5	Q5T8D3	534 aa	Predicted RBP	10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	SYT10	Q6XYQ8	523 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	SLC41A1	Q8IVJ1	513 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	DEFB119	Q8N690	84 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	CCDC185	Q8N715	623 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	TOE1	Q96GM8	510 aa	Known RBP	10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	RPRD1A	Q96P16	312 aa	Predicted RBP	10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	MAGEB5	Q9BZ81	275 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	PCED1A	Q9H1Q7	454 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	CD93	Q9NPY3	652 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	PRSS16	Q9NQE7	514 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	TMPRSS4	Q9NRS4	437 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	SUSD2	Q9UGT4	822 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	INTS6	Q9UL03	887 aa	Known RBP	10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	SLC6A14	Q9UN76	642 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	THADA	Q6YHU6	1953 aa		10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	ATXN2	Q99700	1313 aa	Known RBP	10.84	□□□□□ -0.67
SCAMP4-208	ENST00000489554	C3orf70	A6NLC5	250 aa	Predicted RBP	10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	C4orf47	A7E2U8	309 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	ENC1	O14682	589 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	PAGE1	O75459	146 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	DNTT	P04053	509 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	CFI	P05156	583 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	GNS	P15586	552 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	RDX	P35241	583 aa	Known RBP	10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	ARSE	P51690	589 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	ECT2L	Q008S8	904 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	DEUP1	Q05D60	604 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	SULT2A1	Q06520	285 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	AUH	Q13825	339 aa	Known RBP	10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	CA9	Q16790	459 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	HNRNPA1L2	Q32P51	320 aa	Known RBP	10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	TTC31	Q49AM3	519 aa	Predicted RBP	10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	LRRC38	Q5VT99	294 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	RNF219	Q5W0B1	726 aa	Predicted RBP	10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	PAPD7	Q5XG87	772 aa	Known RBP	10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	ZNF776	Q68DI1	518 aa	Predicted RBP	10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	FBXL22	Q6P050	247 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	PEX26	Q7Z412	305 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	FAM131B	Q86XD5	332 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	RGL4	Q8IZJ4	473 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	SYCE1	Q8N0S2	351 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	ZNF366	Q8N895	744 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	FAM71B	Q8TC56	605 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	MYO19	Q96H55	970 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	MRGPRX3	Q96LB0	322 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	ALS2CR12	Q96Q35	445 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	SNRNP25	Q9BV90	132 aa	Known RBP	10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	GPR174	Q9BXC1	333 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	WDCP	Q9H6R7	721 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	ARHGEF38	Q9NXL2	777 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	SCML1	Q9UN30	329 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	ERVW-1	Q9UQF0	538 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	JRKL	Q9Y4A0	524 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	PCDHA3	Q9Y5H8	950 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	HS3ST4	Q9Y661	456 aa		10.83	□□□□□ -0.68
SCAMP4-208	ENST00000489554	MUC22	E2RYF6	1773 aa	Predicted RBP	10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	CKAP5	Q14008	2032 aa		10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	EDDM13	A0A1B0GTR0	161 aa		10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	TARSL2	A2RTX5	802 aa	Known RBP	10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	MEI4	A8MW99	385 aa		10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	CDX4	O14627	284 aa	Predicted RBP	10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	PSTPIP1	O43586	416 aa		10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	SPOP	O43791	374 aa		10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	RNASEH1	O60930	286 aa	Known RBP	10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	CLDN11	O75508	207 aa		10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	SLU7	O95391	586 aa	Known RBP	10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	RARA	P10276	462 aa		10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	ENG	P17813	658 aa		10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	NNMT	P40261	264 aa		10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	PLK1	P53350	603 aa		10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	ATXN3	P54252	364 aa	Predicted RBP	10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	RPS14	P62263	151 aa	Known RBP	10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	SCAP	Q12770	1279 aa		10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	SFSWAP	Q12872	951 aa	Known RBP	10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	SEMA3B	Q13214	749 aa		10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	ZNF177	Q13360	481 aa	Predicted RBP	10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	C5orf22	Q49AR2	442 aa		10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	POLN	Q7Z5Q5	900 aa		10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	CIR1	Q86X95	450 aa	Predicted RBP	10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	CACUL1	Q86Y37	369 aa		10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	APCDD1	Q8J025	514 aa		10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	DNASE2B	Q8WZ79	361 aa		10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	NTAN1	Q96AB6	310 aa		10.82	□□□□□ -0.68
SCAMP4-208	ENST00000489554	HERPUD2	Q9BSE4	406 aa		10.82	□□□□□ -0.68

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