RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 PPP1R37O75864 691 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 LDLRP01130 860 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 PRF1P14222 555 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 IDEP14735 1019 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 RECQLP46063 649 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-233ENST00000489352 SLC11A2P49281 568 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 NDST1P52848 882 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 ALCAMQ13740 583 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 DCAF6Q58WW2 860 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 PIK3R6Q5UE93 754 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 C16orf46Q6P387 395 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 MCEMP1Q8IX19 187 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 CRYBG2Q8N1P7 616 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 Q8N9G6 341 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-233ENST00000489352 OR6C4Q8NGE1 309 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 LARP4BQ92615 738 aaKnown RBP11.87□□□□□ -0.51
HDAC6-233ENST00000489352 RNF34Q969K3 372 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 FAM131CQ96AQ9 280 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 CYFIP2Q96F07 1278 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 TAAR9Q96RI9 348 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 IRX2Q9BZI1 471 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-233ENST00000489352 KLF15Q9UIH9 416 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 STOML2Q9UJZ1 356 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 INTS6Q9UL03 887 aaKnown RBP11.87□□□□□ -0.51
HDAC6-233ENST00000489352 CCDC168Q8NDH2 2452 aa11.87□□□□□ -0.51
HDAC6-233ENST00000489352 A0A1W2PQM1 296 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 FPGTO14772 594 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 YY2O15391 372 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 GCATO75600 419 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 VAV1P15498 845 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 GAP43P17677 238 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 UGT1A3P35503 534 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 TOB1P50616 345 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-233ENST00000489352 BIRC3Q13489 604 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 ME3Q16798 604 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 FAXCQ5TGI0 409 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 CEP135Q66GS9 1140 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 KYAT3Q6YP21 454 aaKnown RBP11.86□□□□□ -0.51
HDAC6-233ENST00000489352 CCNJLQ8IV13 435 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 ARL10Q8N8L6 244 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 HJURPQ8NCD3 748 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-233ENST00000489352 CCDC112Q8NEF3 446 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 BMFQ96LC9 184 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 DDX50Q9BQ39 737 aaKnown RBP11.86□□□□□ -0.51
HDAC6-233ENST00000489352 STRA6Q9BX79 667 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 UNKQ9C0B0 810 aaKnown RBP11.86□□□□□ -0.51
HDAC6-233ENST00000489352 RABGEF1Q9UJ41 708 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 ERRFI1Q9UJM3 462 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-233ENST00000489352 SARDHQ9UL12 918 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 PPM1HQ9ULR3 514 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 FARP1Q9Y4F1 1045 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-233ENST00000489352 KCTD3Q9Y597 815 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 RNF215Q9Y6U7 377 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 ZNF106Q9H2Y7 1883 aaKnown RBP11.86□□□□□ -0.51
HDAC6-233ENST00000489352 TACC2O95359 2948 aa11.86□□□□□ -0.51
HDAC6-233ENST00000489352 POM121BA6NF01 834 aa11.85□□□□□ -0.51
HDAC6-233ENST00000489352 DUX1O43812 170 aa11.85□□□□□ -0.51
HDAC6-233ENST00000489352 BNIP3LO60238 219 aa11.85□□□□□ -0.51
HDAC6-233ENST00000489352 TCN2P20062 427 aa11.85□□□□□ -0.51
HDAC6-233ENST00000489352 ITGB7P26010 798 aa11.85□□□□□ -0.51
HDAC6-233ENST00000489352 LEPRP48357 1165 aaKnown RBP11.85□□□□□ -0.51
HDAC6-233ENST00000489352 STK19P49842 368 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-233ENST00000489352 THOP1P52888 689 aa11.85□□□□□ -0.51
HDAC6-233ENST00000489352 TAS2R38P59533 333 aa11.85□□□□□ -0.51
HDAC6-233ENST00000489352 ZFP36L1Q07352 338 aaKnown RBP11.85□□□□□ -0.51
HDAC6-233ENST00000489352 MRPL49Q13405 166 aaKnown RBP11.85□□□□□ -0.51
HDAC6-233ENST00000489352 PTK2BQ14289 1009 aa11.85□□□□□ -0.51
HDAC6-233ENST00000489352 MMS22LQ6ZRQ5 1243 aa11.85□□□□□ -0.51
HDAC6-233ENST00000489352 UNC93AQ86WB7 457 aa11.85□□□□□ -0.51
HDAC6-233ENST00000489352 RBFAQ8N0V3 343 aa11.85□□□□□ -0.51
HDAC6-233ENST00000489352 AK8Q96MA6 479 aa11.85□□□□□ -0.51
HDAC6-233ENST00000489352 XYLT2Q9H1B5 865 aa11.85□□□□□ -0.51
HDAC6-233ENST00000489352 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.85□□□□□ -0.51
HDAC6-233ENST00000489352 BLOC1S4Q9NUP1 217 aa11.85□□□□□ -0.51
HDAC6-233ENST00000489352 SFMBT1Q9UHJ3 866 aa11.85□□□□□ -0.51
HDAC6-233ENST00000489352 SLC5A6Q9Y289 635 aa11.85□□□□□ -0.51
HDAC6-233ENST00000489352 USP3Q9Y6I4 520 aa11.85□□□□□ -0.51
HDAC6-233ENST00000489352 TNRC6AQ8NDV7 1962 aaKnown RBP11.85□□□□□ -0.51
HDAC6-233ENST00000489352 ANKHD1Q8IWZ3 2542 aaKnown RBP11.85□□□□□ -0.51
HDAC6-233ENST00000489352 GOLGA6L7A0A1B0GV03 622 aa11.84□□□□□ -0.51
HDAC6-233ENST00000489352 TCP11X1B4DZS4 312 aa11.84□□□□□ -0.51
HDAC6-233ENST00000489352 PAK4O96013 591 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-233ENST00000489352 PDCP20941 246 aa11.84□□□□□ -0.51
HDAC6-233ENST00000489352 NOP2P46087 812 aaKnown RBP11.84□□□□□ -0.51
HDAC6-233ENST00000489352 SGCGQ13326 291 aa11.84□□□□□ -0.51
HDAC6-233ENST00000489352 SNRNP35Q16560 246 aaKnown RBP11.84□□□□□ -0.51
HDAC6-233ENST00000489352 PPP1R26Q5T8A7 1209 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-233ENST00000489352 UNC45BQ8IWX7 931 aa11.84□□□□□ -0.51
HDAC6-233ENST00000489352 PHACTR4Q8IZ21 702 aa11.84□□□□□ -0.51
HDAC6-233ENST00000489352 FAM184AQ8NB25 1140 aa11.84□□□□□ -0.51
HDAC6-233ENST00000489352 KYQ8NBH2 561 aa11.84□□□□□ -0.51
HDAC6-233ENST00000489352 FBXO18Q8NFZ0 1043 aa11.84□□□□□ -0.51
HDAC6-233ENST00000489352 TCTN2Q96GX1 697 aa11.84□□□□□ -0.51
HDAC6-233ENST00000489352 DUSP16Q9BY84 665 aa11.84□□□□□ -0.51
HDAC6-233ENST00000489352 SLC17A9Q9BYT1 436 aa11.84□□□□□ -0.51
HDAC6-233ENST00000489352 ENTPD4Q9Y227 616 aa11.84□□□□□ -0.51
HDAC6-233ENST00000489352 DAAM1Q9Y4D1 1078 aa11.84□□□□□ -0.51
HDAC6-233ENST00000489352 MAP4K5Q9Y4K4 846 aa11.84□□□□□ -0.51
HDAC6-233ENST00000489352 PCDHB3Q9Y5E6 796 aa11.84□□□□□ -0.51
HDAC6-233ENST00000489352 K7EM74 188 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms