RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 SPEGQ15772 3267 aa14.35□□□□□ -0.11
VTI1A-206ENST00000489142 TBC1D3DA0A087WVF3 549 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 TBC1D3IA0A087WXS9 549 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 TBC1D3EA0A087X179 549 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 TBC1D3KA0A087X1G2 549 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 A0A1W2PPC4 97 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 TCRBV5S1A1TA0A578 114 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 TBC1D3FA6NER0 549 aaPredicted RBP14.34□□□□□ -0.11
VTI1A-206ENST00000489142 UPK3BL1B0FP48 263 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 TBC1D3LB9A6J9 549 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 UPK3BL2E5RIL1 263 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 MCF2LO15068 1137 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 PLEKP08567 350 aaPredicted RBP14.34□□□□□ -0.11
VTI1A-206ENST00000489142 TBC1D3HP0C7X1 549 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 ACVRL1P37023 503 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 GRIA4P48058 902 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 GSCP56915 257 aaPredicted RBP14.34□□□□□ -0.11
VTI1A-206ENST00000489142 ARF5P84085 180 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 OGDHQ02218 1023 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 GNA12Q03113 381 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 C1QBPQ07021 282 aaKnown RBP14.34□□□□□ -0.11
VTI1A-206ENST00000489142 SFSWAPQ12872 951 aaKnown RBP14.34□□□□□ -0.11
VTI1A-206ENST00000489142 IQCB1Q15051 598 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 ASIC2Q16515 512 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 ARL13BQ3SXY8 428 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 PRAMEF14Q5SWL7 426 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 MANEALQ5VSG8 457 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 AGBL4Q5VU57 503 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 TBC1D3GQ6DHY5 549 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 TBC1D3CQ6IPX1 549 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 SCYL2Q6P3W7 929 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 C22orf39Q6P5X5 142 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 LEKR1Q6ZMV7 388 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 STRADAQ7RTN6 431 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 DSG4Q86SJ6 1040 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 LUZP1Q86V48 1076 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 TBC1D3Q8IZP1 549 aaPredicted RBP14.34□□□□□ -0.11
VTI1A-206ENST00000489142 OR2A12Q8NGT7 310 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 SETD7Q8WTS6 366 aaKnown RBP14.34□□□□□ -0.11
VTI1A-206ENST00000489142 CENPIQ92674 756 aaPredicted RBP14.34□□□□□ -0.11
VTI1A-206ENST00000489142 AASDHPPTQ9NRN7 309 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 TM7SF3Q9NS93 570 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 PPM1HQ9ULR3 514 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 NEU3Q9UQ49 428 aa14.34□□□□□ -0.11
VTI1A-206ENST00000489142 FCF1Q9Y324 198 aaKnown RBP14.34□□□□□ -0.11
VTI1A-206ENST00000489142 A0A1B0GTH6 734 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 ILVBLA1L0T0 632 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 SIGLEC16A6NMB1 481 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 C1QTNF3-AMACRE9PGA6 284 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 H0Y8X5 98 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 KPNA3O00505 521 aaPredicted RBP14.33□□□□□ -0.12
VTI1A-206ENST00000489142 HYAL3O43820 417 aaPredicted RBP14.33□□□□□ -0.12
VTI1A-206ENST00000489142 ZMPSTE24O75844 475 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 LRIG2O94898 1065 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 SERPINC1P01008 464 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 WNT1P04628 370 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 TNFAIP3P21580 790 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 CHRNA3P32297 505 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 VASPP50552 380 aaPredicted RBP14.33□□□□□ -0.12
VTI1A-206ENST00000489142 DNA2P51530 1060 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 SHC2P98077 582 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 FILIP1LQ4L180 1135 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 ACAD10Q6JQN1 1059 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 IL27RAQ6UWB1 636 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 MCOLN2Q8IZK6 566 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 ARRDC3Q96B67 414 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 SYT11Q9BT88 431 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 HAUS4Q9H6D7 363 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 CBX8Q9HC52 389 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 PPARGC1AQ9UBK2 798 aaKnown RBP14.33□□□□□ -0.12
VTI1A-206ENST00000489142 BTBD3Q9Y2F9 522 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 PCDHB9Q9Y5E1 797 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 AKAP13Q12802 2813 aa14.33□□□□□ -0.12
VTI1A-206ENST00000489142 CEP295Q9C0D2 2601 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 ALOX15BO15296 676 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 PLRG1O43660 514 aaKnown RBP14.32□□□□□ -0.12
VTI1A-206ENST00000489142 ZNF821O75541 412 aaPredicted RBP14.32□□□□□ -0.12
VTI1A-206ENST00000489142 SKILP12757 684 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 SERPINH1P50454 418 aaKnown RBP14.32□□□□□ -0.12
VTI1A-206ENST00000489142 ZNF143P52747 638 aaPredicted RBP14.32□□□□□ -0.12
VTI1A-206ENST00000489142 C21orf59P57076 290 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 RACK1P63244 317 aaKnown RBP14.32□□□□□ -0.12
VTI1A-206ENST00000489142 SLC14A1Q13336 389 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 TRIP6Q15654 476 aaKnown RBP14.32□□□□□ -0.12
VTI1A-206ENST00000489142 ARSIQ5FYB1 569 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 PPP1R15BQ5SWA1 713 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 ACBD5Q5T8D3 534 aaPredicted RBP14.32□□□□□ -0.12
VTI1A-206ENST00000489142 FAM46CQ5VWP2 391 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 DCUN1D2Q6PH85 259 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 DPY19L3Q6ZPD9 716 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 ZNF571Q7Z3V5 609 aaPredicted RBP14.32□□□□□ -0.12
VTI1A-206ENST00000489142 NLRP14Q86W24 1093 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 PNPLA1Q8N8W4 532 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 NETO2Q8NC67 525 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 KLK6Q92876 244 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 TBC1D31Q96DN5 1066 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 SERAC1Q96JX3 654 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 MYOCQ99972 504 aa14.32□□□□□ -0.12
VTI1A-206ENST00000489142 ACE2Q9BYF1 805 aaPredicted RBP14.32□□□□□ -0.12
VTI1A-206ENST00000489142 TM6SF2Q9BZW4 377 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms