RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 RING1Q06587 406 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 NIPAL4Q0D2K0 466 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 LAMB3Q13751 1172 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 EFTUD2Q15029 972 aaKnown RBP eCLIP6.76□□□□□ -1.332e-6■■□□□ 13.2
HDLBP-243ENST00000488923 TRIP4Q15650 581 aaPredicted RBP6.76□□□□□ -1.33
HDLBP-243ENST00000488923 SLC1A5Q15758 541 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 UGP2Q16851 508 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 GALNTL6Q49A17 601 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 SLC39A12Q504Y0 691 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 PLEKHG4Q58EX7 1191 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 CLLU1OSQ5K130 101 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 FAM72AQ5TYM5 149 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 MANEALQ5VSG8 457 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 KCTD11Q693B1 232 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 FAM72DQ6L9T8 149 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 RWDD4Q6NW29 188 aaKnown RBP6.76□□□□□ -1.33
HDLBP-243ENST00000488923 PACS1Q6VY07 963 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 SH2D5Q6ZV89 423 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 TMEM135Q86UB9 458 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 LRRTM3Q86VH5 581 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 FAM72BQ86X60 149 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 KRTAP1-3Q8IUG1 177 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 NPAS4Q8IUM7 802 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 RTL3Q8N8U3 475 aaKnown RBP6.76□□□□□ -1.33
HDLBP-243ENST00000488923 CCDC63Q8NA47 563 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 PDZD8Q8NEN9 1154 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 ADAM32Q8TC27 787 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 HASPINQ8TF76 798 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 OVCA2Q8WZ82 227 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 CERS2Q96G23 380 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 BTN2A3PQ96KV6 586 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 FCRL2Q96LA5 508 aaPredicted RBP6.76□□□□□ -1.33
HDLBP-243ENST00000488923 C7orf26Q96N11 449 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 TSNARE1Q96NA8 513 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 LRRC37BQ96QE4 947 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 RAB3IPQ96QF0 476 aaPredicted RBP6.76□□□□□ -1.33
HDLBP-243ENST00000488923 FCRL5Q96RD9 977 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 SRPK1Q96SB4 655 aaKnown RBP6.76□□□□□ -1.33
HDLBP-243ENST00000488923 IL12RB2Q99665 862 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 TSSK1BQ9BXA7 367 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 STN1Q9H668 368 aaKnown RBP6.76□□□□□ -1.33
HDLBP-243ENST00000488923 MRM3Q9HC36 420 aaKnown RBP6.76□□□□□ -1.33
HDLBP-243ENST00000488923 MLXIPLQ9NP71 852 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 POLMQ9NP87 494 aaPredicted RBP6.76□□□□□ -1.33
HDLBP-243ENST00000488923 SAR1AQ9NR31 198 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 VPS45Q9NRW7 570 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 TMLHEQ9NVH6 421 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 ABI2Q9NYB9 513 aaPredicted RBP6.76□□□□□ -1.33
HDLBP-243ENST00000488923 HSFX1Q9UBD0 423 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 CACNG4Q9UBN1 327 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 MTO1Q9Y2Z2 717 aaKnown RBP6.76□□□□□ -1.33
HDLBP-243ENST00000488923 PLLPQ9Y342 182 aa6.76□□□□□ -1.33
HDLBP-243ENST00000488923 WDR27A2RRH5 827 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 KCNU1A8MYU2 1149 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 E9PAM4 449 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 KCNK1O00180 336 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 ENPP3O14638 875 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 AOC2O75106 756 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 RFPL1O75677 317 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 TRPA1O75762 1119 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 SNUPNO95149 360 aaKnown RBP6.75□□□□□ -1.33
HDLBP-243ENST00000488923 CSH1P0DML2 217 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 CSH2P0DML3 217 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 CPB1P15086 417 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 NFKB1P19838 968 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 IBSPP21815 317 aaPredicted RBP6.75□□□□□ -1.33
HDLBP-243ENST00000488923 GRK2P25098 689 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 ADRA1DP25100 572 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 YWHAQP27348 245 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 SERPINB4P48594 390 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 TUFMP49411 452 aaKnown RBP6.75□□□□□ -1.33
HDLBP-243ENST00000488923 RENBPP51606 427 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 KPNA2P52292 529 aaKnown RBP6.75□□□□□ -1.33
HDLBP-243ENST00000488923 PRKAA2P54646 552 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 TBX4P57082 545 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 SESN2P58004 480 aaPredicted RBP6.75□□□□□ -1.33
HDLBP-243ENST00000488923 YBEYP58557 167 aaPredicted RBP6.75□□□□□ -1.33
HDLBP-243ENST00000488923 PDE1BQ01064 536 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 BNIP1Q12981 228 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 GPR17Q13304 367 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 MPP3Q13368 585 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 HNRNPDQ14103 355 aaKnown RBP6.75□□□□□ -1.33
HDLBP-243ENST00000488923 MBTPS1Q14703 1052 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 TBCCQ15814 346 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 PARP15Q460N3 678 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 CCDC153Q494R4 210 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 PCID2Q5JVF3 399 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 FAM171A1Q5VUB5 890 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 AFMIDQ63HM1 303 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 PDPK2PQ6A1A2 396 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 FAM47EQ6ZV65 393 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 SCD5Q86SK9 330 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 PRPF39Q86UA1 669 aaKnown RBP6.75□□□□□ -1.33
HDLBP-243ENST00000488923 RTN4RL1Q86UN2 441 aaPredicted RBP6.75□□□□□ -1.33
HDLBP-243ENST00000488923 ZNF280BQ86YH2 543 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 NUDCD3Q8IVD9 361 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 FAM126BQ8IXS8 530 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 LMNTD2Q8IXW0 634 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 NDUFAF2Q8N183 169 aa6.75□□□□□ -1.33
HDLBP-243ENST00000488923 UMODL1-AS1Q8N2C9 162 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms