RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 WHRNQ9P202 907 aa7.73□□□□□ -1.17
APOBEC3A-203ENST00000488758 KIAA1522Q9P206 1035 aaPredicted RBP7.73□□□□□ -1.17
APOBEC3A-203ENST00000488758 KLHL8Q9P2G9 620 aaPredicted RBP7.73□□□□□ -1.17
APOBEC3A-203ENST00000488758 ZNF212Q9UDV6 495 aa7.73□□□□□ -1.17
APOBEC3A-203ENST00000488758 MTRF1LQ9UGC7 380 aaKnown RBP7.73□□□□□ -1.17
APOBEC3A-203ENST00000488758 CDH22Q9UJ99 828 aa7.73□□□□□ -1.17
APOBEC3A-203ENST00000488758 TRHDEQ9UKU6 1024 aa7.73□□□□□ -1.17
APOBEC3A-203ENST00000488758 TPX2Q9ULW0 747 aaKnown RBP7.73□□□□□ -1.17
APOBEC3A-203ENST00000488758 TBC1D30Q9Y2I9 924 aa7.73□□□□□ -1.17
APOBEC3A-203ENST00000488758 WNT6Q9Y6F9 365 aa7.73□□□□□ -1.17
APOBEC3A-203ENST00000488758 VCANP13611 3396 aa7.73□□□□□ -1.17
APOBEC3A-203ENST00000488758 C2orf16Q68DN1 1984 aa7.73□□□□□ -1.17
APOBEC3A-203ENST00000488758 DOCK4Q8N1I0 1966 aa7.73□□□□□ -1.17
APOBEC3A-203ENST00000488758 HELZP42694 1942 aaKnown RBP7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 A0A0D9SEW6 157 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 CCDC151A5D8V7 595 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 E7EVH7 732 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 NEDD8-MDP1E9PL57 170 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 RNF103O00237 685 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 GFRA2O00451 464 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 DNALI1O14645 258 aaPredicted RBP7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 KDELR3O43731 214 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 MAFKO60675 156 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 OPHN1O60890 802 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 JCHAINP01591 159 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 LAMP2P13473 410 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 CCNB1P14635 433 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 PTPN3P26045 913 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 TNFRSF8P28908 595 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 ACVRL1P37023 503 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 FDFT1P37268 417 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 GCGRP47871 477 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 LMAN1P49257 510 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 ITGA8P53708 1063 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 NRLP54845 237 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 BASP1P80723 227 aaKnown RBP7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 GAD2Q05329 585 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 IL10RBQ08334 325 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 WASHC5Q12768 1159 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 NR1H3Q13133 447 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 PRPSAP1Q14558 356 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 COL19A1Q14993 1142 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 PDGFRLQ15198 375 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 TRADDQ15628 312 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 PARP6Q2NL67 630 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 TEX44Q53QW1 395 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 LY6G5CQ5SRR4 150 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 MARC1Q5VT66 337 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 ITPRIPL1Q6GPH6 555 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 TANGO2Q6ICL3 276 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 CXorf57Q6NSI4 855 aaKnown RBP7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 ARHGAP36Q6ZRI8 547 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 OTOP3Q7RTS5 596 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 BBS5Q8N3I7 341 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 TAB3Q8N5C8 712 aaPredicted RBP7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 GLIS1Q8NBF1 620 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 OR7D4Q8NG98 312 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 FIBINQ8TAL6 211 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 RIN3Q8TB24 985 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 OSCP1Q8WVF1 389 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 PPM1EQ8WY54 764 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 SEC14L1Q92503 715 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 AGAP3Q96P47 875 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 MYADMQ96S97 322 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 BBS2Q9BXC9 721 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 FAM129AQ9BZQ8 928 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 POMKQ9H5K3 350 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 ATP13A1Q9HD20 1204 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 RAB6BQ9NRW1 208 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 HAUS2Q9NVX0 235 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 RBM22Q9NW64 420 aaKnown RBP eCLIP7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 PLK2Q9NYY3 685 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 NFU1Q9UMS0 254 aa7.72□□□□□ -1.17
APOBEC3A-203ENST00000488758 GOLGA6CA6NDK9 693 aa7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 GOLGA6BA6NDN3 693 aa7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 H3BQ06 376 aaPredicted RBP7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 J3KR12 359 aa7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 CBX4O00257 560 aa7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 ZBTB24O43167 697 aaPredicted RBP7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 PSMD3O43242 534 aa7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 PRAMEF11O60813 436 aa7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 SEC31AO94979 1220 aaKnown RBP7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 METTL18O95568 372 aa7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 NFATC1O95644 943 aa7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 ADH1CP00326 375 aa7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 GOLGA6DP0CG33 693 aa7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 ADH5P11766 374 aa7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 TYRP14679 529 aa7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 KCNA5P22460 613 aa7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 IVDP26440 423 aa7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 HOXD9P28356 352 aaPredicted RBP7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 PLA2G5P39877 138 aa7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 CSKP41240 450 aa7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 IFI35P80217 286 aaPredicted RBP7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 SARNPP82979 210 aaKnown RBP7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 ITKQ08881 620 aa7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 SLC12A1Q13621 1099 aa7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 HNRNPDQ14103 355 aaKnown RBP7.71□□□□□ -1.18
APOBEC3A-203ENST00000488758 LBRQ14739 615 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms