RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 FAM129BQ96TA1 746 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 KLC2Q9H0B6 622 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 PABPC3Q9H361 631 aaKnown RBP16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 LRRC19Q9H756 370 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 PCDH18Q9HCL0 1135 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 WSB2Q9NYS7 404 aaPredicted RBP16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 IMPACTQ9P2X3 320 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 CXorf51AA0A1B0GTR3 108 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 TMEM110-MUSTN1A8MSY1 372 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 RASA4BC9J798 803 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 H3BRJ5 948 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 MID1O15344 667 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 MAP3K13O43283 966 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 RASA4O43374 803 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 ZNF821O75541 412 aaPredicted RBP16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 NDUFA10O95299 355 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 DNTTP04053 509 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 ERCC2P18074 760 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 TGM1P22735 817 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 CYLC1P35663 651 aaPredicted RBP16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 GJC1P36383 396 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 PTGER3P43115 390 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 SSR1P43307 286 aaKnown RBP16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 MAGEA1P43355 309 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 HCAR3P49019 387 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 YBEYP58557 167 aaPredicted RBP16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 RPL6Q02878 288 aaKnown RBP16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 MESDQ14696 234 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 TTC31Q49AM3 519 aaPredicted RBP16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 RAD9BQ6WBX8 426 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 ARMCX6Q7L4S7 300 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 POLNQ7Z5Q5 900 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 KIAA2013Q8IYS2 634 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 TSC1Q92574 1164 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 TOE1Q96GM8 510 aaKnown RBP16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 CSPG4P5Q96PW8 444 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 PARD6AQ9NPB6 346 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 TFR2Q9UP52 801 aa16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 FCF1Q9Y324 198 aaKnown RBP16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 EPN1Q9Y6I3 576 aaPredicted RBP16.34■□□□□ 0.21
ERGIC3-216ENST00000488384 ALOX15BO15296 676 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 DAPK3O43293 454 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 KDELR3O43731 214 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 RNASEH1O60930 286 aaKnown RBP16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 ARL4AP40617 200 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 DHPSP49366 369 aaPredicted RBP16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 ARSEP51690 589 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 NDST2P52849 883 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 METAP1P53582 386 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 SLC20A2Q08357 652 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 SERINC3Q13530 473 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 SPA17Q15506 151 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 HADHQ16836 314 aaKnown RBP16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 SPDYCQ5MJ68 293 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 AFMIDQ63HM1 303 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 LEKR1Q6ZMV7 388 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 FAM124AQ86V42 546 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 SLC41A1Q8IVJ1 513 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 ARHGAP12Q8IWW6 846 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 DEFB119Q8N690 84 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 OR2A12Q8NGT7 310 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 FAM71BQ8TC56 605 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 OR8D1Q8WZ84 308 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 CELF6Q96J87 481 aaKnown RBP16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 CEP44Q9C0F1 390 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 ARRDC1-AS1Q9H2J1 176 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 TNKS2Q9H2K2 1166 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 KLHL11Q9NVR0 708 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 DONSONQ9NYP3 566 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 SERGEFQ9UGK8 458 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 SCML1Q9UN30 329 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 REXO2Q9Y3B8 237 aaKnown RBP16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 MFHAS1Q9Y4C4 1052 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 PCDHGA5Q9Y5G8 931 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 PCDHA13Q9Y5I0 950 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 CEP192Q8TEP8 1941 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 NUP205Q92621 2012 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 NUMA1Q14980 2115 aa16.33■□□□□ 0.2
ERGIC3-216ENST00000488384 BCLAF3A2AJT9 711 aaKnown RBP16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 ZSCAN5CA6NGD5 496 aaPredicted RBP16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 MCF2LO15068 1137 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 BNIP3LO60238 219 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 ADH1BP00325 375 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 CTSLP07711 333 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 CD48P09326 243 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 OXTRP30559 389 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 SLC8A1P32418 973 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 MPLP40238 635 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 ARHGAP25P42331 645 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 ID4P47928 161 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 HADHBP55084 474 aaKnown RBP16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 CDH6P55285 790 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 GEMIN4P57678 1058 aaKnown RBP16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 CREB5Q02930 508 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 SPEM2Q0P670 501 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 CCDC6Q16204 474 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 ATP13A4Q4VNC1 1196 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 LYSMD4Q5XG99 296 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 USP30Q70CQ3 517 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 CYP2U1Q7Z449 544 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms