RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 SCNN1AP37088 669 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 ARRB1P49407 418 aaPredicted RBP12.5□□□□□ -0.41
VPS16-208ENST00000487461 CLDN6P56747 220 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 KRT83P78385 493 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 DNAJC3Q13217 504 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 COL9A2Q14055 689 aaPredicted RBP12.5□□□□□ -0.41
VPS16-208ENST00000487461 STAT4Q14765 748 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 FAM102AQ5T9C2 384 aaPredicted RBP12.5□□□□□ -0.41
VPS16-208ENST00000487461 PIP5KL1Q5T9C9 394 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 LRRC31Q6UY01 552 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 LINGO4Q6UY18 593 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 KANSL1Q7Z3B3 1105 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 SETD3Q86TU7 594 aaPredicted RBP12.5□□□□□ -0.41
VPS16-208ENST00000487461 NOP9Q86U38 636 aaKnown RBP12.5□□□□□ -0.41
VPS16-208ENST00000487461 IQCHQ86VS3 1027 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 CHST14Q8NCH0 376 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 CPA5Q8WXQ8 436 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 ARRDC3Q96B67 414 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 CHMP5Q9NZZ3 219 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 DKK4Q9UBT3 224 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 TMEM59LQ9UK28 342 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 DMTF1Q9Y222 760 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 DOCK9Q9BZ29 2069 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 IGLV3-10A0A075B6K4 115 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 E9PAM4 449 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 PRAMEF26H0Y7S4 382 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 GOLGA8SH3BPF8 625 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 PES1O00541 588 aaKnown RBP12.49□□□□□ -0.41
VPS16-208ENST00000487461 SLC31A1O15431 190 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 RNGTTO60942 597 aaKnown RBP12.49□□□□□ -0.41
VPS16-208ENST00000487461 SRGAP2O75044 1071 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 MMEP08473 750 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 UCHL3P15374 230 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 NUDT1P36639 197 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 TCP11X2Q5H9J9 407 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 BNIPLQ7Z465 357 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 TFAP2DQ7Z6R9 452 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 TMPRSS12Q86WS5 348 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 PDCD7Q8N8D1 485 aaKnown RBP12.49□□□□□ -0.41
VPS16-208ENST00000487461 TMIEQ8NEW7 156 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 OR7D4Q8NG98 312 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 HNRNPLLQ8WVV9 542 aaKnown RBP12.49□□□□□ -0.41
VPS16-208ENST00000487461 TSC1Q92574 1164 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 KLK6Q92876 244 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 HAPLN3Q96S86 360 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 C2orf49Q9BVC5 232 aaPredicted RBP12.49□□□□□ -0.41
VPS16-208ENST00000487461 STK33Q9BYT3 514 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 PREBQ9HCU5 417 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 ZNF212Q9UDV6 495 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 FARP1Q9Y4F1 1045 aaPredicted RBP12.49□□□□□ -0.41
VPS16-208ENST00000487461 PCDHGA1Q9Y5H4 931 aa12.49□□□□□ -0.41
VPS16-208ENST00000487461 ARID1BQ8NFD5 2236 aaPredicted RBP12.49□□□□□ -0.41
VPS16-208ENST00000487461 LAMA5O15230 3695 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 A0A1W2PQU0 124 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 KPNA3O00505 521 aaPredicted RBP12.48□□□□□ -0.41
VPS16-208ENST00000487461 ZNF821O75541 412 aaPredicted RBP12.48□□□□□ -0.41
VPS16-208ENST00000487461 RFPL3O75679 317 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 ZMPSTE24O75844 475 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 ENDOD1O94919 500 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 LSM8O95777 96 aaKnown RBP12.48□□□□□ -0.41
VPS16-208ENST00000487461 C1SP09871 688 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 JUPP14923 745 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 OR1E1P30953 314 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 ACADVLP49748 655 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 OVGP1Q12889 678 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 COL28A1Q2UY09 1125 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 ZNF284Q2VY69 593 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 SETMARQ53H47 684 aaPredicted RBP12.48□□□□□ -0.41
VPS16-208ENST00000487461 RAB6CQ53S08 254 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 ARSIQ5FYB1 569 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 C6orf118Q5T5N4 469 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 SFMBT2Q5VUG0 894 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 NAA35Q5VZE5 725 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 OXR1Q8N573 874 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 DCAF4L2Q8NA75 395 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 TMEM145Q8NBT3 493 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 KLHDC7BQ96G42 594 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 CFAP57Q96MR6 1250 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 SPON2Q9BUD6 331 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 RAB6CQ9H0N0 254 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 TNKS2Q9H2K2 1166 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 TMEM51Q9NW97 253 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 DACH1Q9UI36 760 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 PAXBP1Q9Y5B6 917 aa12.48□□□□□ -0.41
VPS16-208ENST00000487461 ADAMTS20P59510 1910 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 ILVBLA1L0T0 632 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 F8VZ95 297 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 MAGEC1O60732 1142 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 SDC3O75056 442 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 PRNPP04156 253 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 PRLRP16471 622 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 CHRNB2P17787 502 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 CLCN6P51797 869 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 NOMO3P69849 1222 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 ACBD5Q5T8D3 534 aaPredicted RBP12.47□□□□□ -0.41
VPS16-208ENST00000487461 NEK5Q6P3R8 708 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 DPY19L3Q6ZPD9 716 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 ARCQ7LC44 396 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 PHLDB2Q86SQ0 1253 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 HORMAD1Q86X24 394 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms