RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 NOS2P35228 1153 aa12.02□□□□□ -0.49
TRIM56-204ENST00000487252 ECT2LQ008S8 904 aa12.02□□□□□ -0.49
TRIM56-204ENST00000487252 TMEM259Q4ZIN3 620 aa12.02□□□□□ -0.49
TRIM56-204ENST00000487252 PITRM1Q5JRX3 1037 aa12.02□□□□□ -0.49
TRIM56-204ENST00000487252 FAM46CQ5VWP2 391 aa12.02□□□□□ -0.49
TRIM56-204ENST00000487252 MFN1Q8IWA4 741 aa12.02□□□□□ -0.49
TRIM56-204ENST00000487252 FRS2Q8WU20 508 aa12.02□□□□□ -0.49
TRIM56-204ENST00000487252 ZNF516Q92618 1163 aa12.02□□□□□ -0.49
TRIM56-204ENST00000487252 KLK6Q92876 244 aa12.02□□□□□ -0.49
TRIM56-204ENST00000487252 MARVELD3Q96A59 401 aa12.02□□□□□ -0.49
TRIM56-204ENST00000487252 JAKMIP2Q96AA8 810 aa12.02□□□□□ -0.49
TRIM56-204ENST00000487252 RBSNQ9H1K0 784 aa12.02□□□□□ -0.49
TRIM56-204ENST00000487252 MRPL44Q9H9J2 332 aaKnown RBP12.02□□□□□ -0.49
TRIM56-204ENST00000487252 OLFML3Q9NRN5 406 aa12.02□□□□□ -0.49
TRIM56-204ENST00000487252 FAM49BQ9NUQ9 324 aa12.02□□□□□ -0.49
TRIM56-204ENST00000487252 ZFR2Q9UPR6 939 aaKnown RBP12.02□□□□□ -0.49
TRIM56-204ENST00000487252 MAP4K5Q9Y4K4 846 aa12.02□□□□□ -0.49
TRIM56-204ENST00000487252 PCDHGA3Q9Y5H0 932 aa12.02□□□□□ -0.49
TRIM56-204ENST00000487252 PCSK5Q92824 1860 aa12.02□□□□□ -0.49
TRIM56-204ENST00000487252 TRPM6Q9BX84 2022 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 EFCAB7A8K855 629 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 IRAK2O43187 625 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 SPINT1O43278 529 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 CNTN5O94779 1100 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 ADORA2BP29275 332 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 UGT1A3P35503 534 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 RECQLP46063 649 aaPredicted RBP12.01□□□□□ -0.49
TRIM56-204ENST00000487252 NASPP49321 788 aaPredicted RBP12.01□□□□□ -0.49
TRIM56-204ENST00000487252 NDST1P52848 882 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 MAPK10P53779 464 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 CDC20Q12834 499 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 EIF2B5Q13144 721 aaKnown RBP12.01□□□□□ -0.49
TRIM56-204ENST00000487252 FGL2Q14314 439 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 EIF2S3LQ2VIR3 472 aaKnown RBP12.01□□□□□ -0.49
TRIM56-204ENST00000487252 CRTC2Q53ET0 693 aaPredicted RBP12.01□□□□□ -0.49
TRIM56-204ENST00000487252 FAM133BQ5BKY9 247 aaKnown RBP12.01□□□□□ -0.49
TRIM56-204ENST00000487252 FSCBQ5H9T9 825 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 TPRG1LQ5T0D9 272 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 TMEM164Q5U3C3 297 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 RFWD3Q6PCD5 774 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 PTAR1Q7Z6K3 402 aaPredicted RBP12.01□□□□□ -0.49
TRIM56-204ENST00000487252 UNC93AQ86WB7 457 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 SLITRK4Q8IW52 837 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 ARHGAP18Q8N392 663 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 SDR16C5Q8N3Y7 309 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 NOC3LQ8WTT2 800 aaKnown RBP12.01□□□□□ -0.49
TRIM56-204ENST00000487252 CCDC74AQ96AQ1 378 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 AK8Q96MA6 479 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 LRRN3Q9H3W5 708 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 GDPD2Q9HCC8 539 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 NAALADL1Q9UQQ1 740 aa12.01□□□□□ -0.49
TRIM56-204ENST00000487252 TTLL8A6PVC2 850 aa12□□□□□ -0.49
TRIM56-204ENST00000487252 YY2O15391 372 aa12□□□□□ -0.49
TRIM56-204ENST00000487252 DUX1O43812 170 aa12□□□□□ -0.49
TRIM56-204ENST00000487252 LETM1O95202 739 aaPredicted RBP12□□□□□ -0.49
TRIM56-204ENST00000487252 OAS2P29728 719 aaKnown RBP12□□□□□ -0.49
TRIM56-204ENST00000487252 VASPP50552 380 aaPredicted RBP12□□□□□ -0.49
TRIM56-204ENST00000487252 ADKP55263 362 aaKnown RBP12□□□□□ -0.49
TRIM56-204ENST00000487252 DNM1Q05193 864 aaKnown RBP12□□□□□ -0.49
TRIM56-204ENST00000487252 PSMD6Q15008 389 aa12□□□□□ -0.49
TRIM56-204ENST00000487252 CCDC183Q5T5S1 534 aa12□□□□□ -0.49
TRIM56-204ENST00000487252 ARL6IP4Q66PJ3 421 aaKnown RBP12□□□□□ -0.49
TRIM56-204ENST00000487252 ESRP1Q6NXG1 681 aaKnown RBP12□□□□□ -0.49
TRIM56-204ENST00000487252 MMS22LQ6ZRQ5 1243 aa12□□□□□ -0.49
TRIM56-204ENST00000487252 BHLHA9Q7RTU4 235 aa12□□□□□ -0.49
TRIM56-204ENST00000487252 IL22RA1Q8N6P7 574 aa12□□□□□ -0.49
TRIM56-204ENST00000487252 ARL10Q8N8L6 244 aa12□□□□□ -0.49
TRIM56-204ENST00000487252 BTN2A2Q8WVV5 523 aa12□□□□□ -0.49
TRIM56-204ENST00000487252 LARP4BQ92615 738 aaKnown RBP12□□□□□ -0.49
TRIM56-204ENST00000487252 RPL10LQ96L21 214 aaKnown RBP12□□□□□ -0.49
TRIM56-204ENST00000487252 PRICKLE1Q96MT3 831 aaPredicted RBP12□□□□□ -0.49
TRIM56-204ENST00000487252 FGFBP2Q9BYJ0 223 aa12□□□□□ -0.49
TRIM56-204ENST00000487252 CPEB1Q9BZB8 566 aaKnown RBP12□□□□□ -0.49
TRIM56-204ENST00000487252 CLPBQ9H078 707 aa12□□□□□ -0.49
TRIM56-204ENST00000487252 KIAA1586Q9HCI6 787 aa12□□□□□ -0.49
TRIM56-204ENST00000487252 SPASTQ9UBP0 616 aa12□□□□□ -0.49
TRIM56-204ENST00000487252 PNMA8BQ9ULN7 279 aaPredicted RBP12□□□□□ -0.49
TRIM56-204ENST00000487252 ENTPD4Q9Y227 616 aa12□□□□□ -0.49
TRIM56-204ENST00000487252 DCHS2Q6V1P9 2916 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 SYCE3A1L190 88 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 TCP11X1B4DZS4 312 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 ALOX15BO15296 676 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 GCNT3O95395 438 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 IGLV3-27P01718 113 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 DLATP10515 647 aaKnown RBP11.99□□□□□ -0.49
TRIM56-204ENST00000487252 HOXB4P17483 251 aaPredicted RBP11.99□□□□□ -0.49
TRIM56-204ENST00000487252 TNNI1P19237 187 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 RABIFP47224 123 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 STK19P49842 368 aaPredicted RBP11.99□□□□□ -0.49
TRIM56-204ENST00000487252 YWHAGP61981 247 aaKnown RBP eCLIP11.99□□□□□ -0.49
TRIM56-204ENST00000487252 KRT85P78386 507 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 HMGN5P82970 282 aaKnown RBP11.99□□□□□ -0.49
TRIM56-204ENST00000487252 TRPC3Q13507 836 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 ALCAMQ13740 583 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 SEPT6Q14141 434 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 TESK1Q15569 626 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 KMT5BQ4FZB7 885 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 PRRT3Q5FWE3 981 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 RAB41Q5JT25 222 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 ASB18Q6ZVZ8 466 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms