RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 IDH3AP50213 366 aa18.3■□□□□ 0.52
PDLIM7-207ENST00000486828 IRF9Q00978 393 aa18.3■□□□□ 0.52
PDLIM7-207ENST00000486828 TSPY1Q01534 308 aa18.3■□□□□ 0.52
PDLIM7-207ENST00000486828 SP3Q02447 781 aa18.3■□□□□ 0.52
PDLIM7-207ENST00000486828 DLG2Q15700 870 aa18.3■□□□□ 0.52
PDLIM7-207ENST00000486828 MANEALQ5VSG8 457 aa18.3■□□□□ 0.52
PDLIM7-207ENST00000486828 ARHGAP36Q6ZRI8 547 aa18.3■□□□□ 0.52
PDLIM7-207ENST00000486828 TNS4Q8IZW8 715 aa18.3■□□□□ 0.52
PDLIM7-207ENST00000486828 GPATCH11Q8N954 259 aa18.3■□□□□ 0.52
PDLIM7-207ENST00000486828 TRIB2Q92519 343 aa18.3■□□□□ 0.52
PDLIM7-207ENST00000486828 NAF1Q96HR8 494 aaKnown RBP18.3■□□□□ 0.52
PDLIM7-207ENST00000486828 FAM161BQ96MY7 647 aa18.3■□□□□ 0.52
PDLIM7-207ENST00000486828 ARHGAP39Q9C0H5 1083 aa18.3■□□□□ 0.52
PDLIM7-207ENST00000486828 SAGE1Q9NXZ1 904 aa18.3■□□□□ 0.52
PDLIM7-207ENST00000486828 INPP5FQ9Y2H2 1132 aa18.3■□□□□ 0.52
PDLIM7-207ENST00000486828 PCDHB12Q9Y5F1 795 aa18.3■□□□□ 0.52
PDLIM7-207ENST00000486828 NUP205Q92621 2012 aa18.3■□□□□ 0.52
PDLIM7-207ENST00000486828 TDRD15B5MCY1 1934 aaKnown RBP18.3■□□□□ 0.52
PDLIM7-207ENST00000486828 PTPRDP23468 1912 aa18.3■□□□□ 0.52
PDLIM7-207ENST00000486828 NLRC5Q86WI3 1866 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 ZNF195O14628 629 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 CLGNO14967 610 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 FGF10O15520 208 aaPredicted RBP18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 TM7SF2O76062 418 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 CSRP3P50461 194 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 SLC5A3P53794 718 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 LPIN1Q14693 890 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 CMPK2Q5EBM0 449 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 BTBD8Q5XKL5 378 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 SCUBE1Q8IWY4 988 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 LZTR1Q8N653 840 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 STMN2Q93045 179 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 SUSD3Q96L08 255 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 FCRL5Q96RD9 977 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 GPR22Q99680 433 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 ADAM2Q99965 735 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 SMOC2Q9H3U7 446 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 BATF3Q9NR55 127 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 CENPFP49454 3210 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 ARHGEF37A1IGU5 675 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 TMEM114B3SHH9 223 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 PAGE1O75459 146 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 TYMPP19971 482 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 CCR1P32246 355 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 CCDC6Q16204 474 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 ANO4Q32M45 955 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 NET1Q7Z628 596 aaPredicted RBP18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 SPATA2LQ8IUW3 424 aaPredicted RBP18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 SPATA22Q8NHS9 363 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 SREK1Q8WXA9 508 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 IL12RB2Q99665 862 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 TBL1YQ9BQ87 522 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 CATSPERBQ9H7T0 1116 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 NMRAL1Q9HBL8 299 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 GLOD4Q9HC38 313 aa18.29■□□□□ 0.52
PDLIM7-207ENST00000486828 F8W8V4 182 aa18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 TNFRSF10BO14763 440 aa18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 MAFKO60675 156 aa18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 ADAMTS4O75173 837 aa18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 SIN3BO75182 1162 aa18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 H2AFYO75367 372 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 ANXA9O76027 345 aa18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 ITGB1P05556 798 aa18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 FCGRTP55899 365 aa18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 THOC5Q13769 683 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 GRM3Q14832 879 aa18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 PCID2Q5JVF3 399 aa18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 PKN3Q6P5Z2 889 aa18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 ZC3HC1Q86WB0 502 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 ACVR1CQ8NER5 493 aa18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 BEGAINQ9BUH8 593 aa18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 SLC39A8Q9C0K1 460 aa18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 RHOJQ9H4E5 214 aa18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 GEMIN8Q9NWZ8 242 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 MID2Q9UJV3 735 aa18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 ANKRD6Q9Y2G4 727 aa18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 CDY1Q9Y6F8 540 aa18.28■□□□□ 0.52
PDLIM7-207ENST00000486828 GOLGA8TH3BQL2 631 aa18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 MATN3O15232 486 aa18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 SEPT4O43236 478 aa18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 LUC7L3O95232 432 aaKnown RBP18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 APOA4P06727 396 aa18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 ASGR1P07306 291 aa18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 SKIP12755 728 aa18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 MXRA7P84157 204 aa18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 CAP1Q01518 475 aa18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 SLC34A1Q06495 639 aa18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 PPP2R5DQ14738 602 aa18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 NAA25Q14CX7 972 aa18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 ARTNQ5T4W7 220 aa18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 CCDC117Q8IWD4 279 aaPredicted RBP18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 ULK2Q8IYT8 1036 aa18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 CASP10Q92851 521 aa18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 FCRL2Q96LA5 508 aaPredicted RBP18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 THTPAQ9BU02 230 aa18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 CDH19Q9H159 772 aa18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 STX18Q9P2W9 335 aaKnown RBP18.27■□□□□ 0.52
PDLIM7-207ENST00000486828 SFMBT1Q9UHJ3 866 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms