RNA–Protein interactions for RNA: ENST00000486549.5

USP4-212, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 749 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-212ENST00000486549 NUP205Q92621 2012 aa15.09■□□□□ 0.01
USP4-212ENST00000486549 TNRC6BQ9UPQ9 1833 aaKnown RBP15.08■□□□□ 0.01
USP4-212ENST00000486549 RASA4BC9J798 803 aa15.08■□□□□ 0
USP4-212ENST00000486549 H3BRJ5 948 aa15.08■□□□□ 0
USP4-212ENST00000486549 RASA4O43374 803 aa15.08■□□□□ 0
USP4-212ENST00000486549 ZMPSTE24O75844 475 aa15.08■□□□□ 0
USP4-212ENST00000486549 EPN2O95208 641 aa15.08■□□□□ 0
USP4-212ENST00000486549 TGM1P22735 817 aa15.08■□□□□ 0
USP4-212ENST00000486549 CD6P30203 668 aa15.08■□□□□ 0
USP4-212ENST00000486549 CREB5Q02930 508 aa15.08■□□□□ 0
USP4-212ENST00000486549 KRT81Q14533 505 aa15.08■□□□□ 0
USP4-212ENST00000486549 SPA17Q15506 151 aa15.08■□□□□ 0
USP4-212ENST00000486549 HADHQ16836 314 aaKnown RBP15.08■□□□□ 0
USP4-212ENST00000486549 TTC31Q49AM3 519 aaPredicted RBP15.08■□□□□ 0
USP4-212ENST00000486549 C22orf39Q6P5X5 142 aa15.08■□□□□ 0
USP4-212ENST00000486549 SLC36A4Q6YBV0 504 aa15.08■□□□□ 0
USP4-212ENST00000486549 PRR23CQ6ZRP0 262 aa15.08■□□□□ 0
USP4-212ENST00000486549 METTL3Q86U44 580 aaKnown RBP15.08■□□□□ 0
USP4-212ENST00000486549 CCDC170Q8IYT3 715 aa15.08■□□□□ 0
USP4-212ENST00000486549 C12orf50Q8NA57 414 aaPredicted RBP15.08■□□□□ 0
USP4-212ENST00000486549 RFFLQ8WZ73 363 aa15.08■□□□□ 0
USP4-212ENST00000486549 HMCESQ96FZ2 354 aa15.08■□□□□ 0
USP4-212ENST00000486549 TOE1Q96GM8 510 aaKnown RBP15.08■□□□□ 0
USP4-212ENST00000486549 CELF6Q96J87 481 aaKnown RBP15.08■□□□□ 0
USP4-212ENST00000486549 ACE2Q9BYF1 805 aaPredicted RBP15.08■□□□□ 0
USP4-212ENST00000486549 TNKS2Q9H2K2 1166 aa15.08■□□□□ 0
USP4-212ENST00000486549 NOL6Q9H6R4 1146 aaKnown RBP15.08■□□□□ 0
USP4-212ENST00000486549 KLHL11Q9NVR0 708 aa15.08■□□□□ 0
USP4-212ENST00000486549 CWC15Q9P013 229 aaKnown RBP15.08■□□□□ 0
USP4-212ENST00000486549 HPCAL4Q9UM19 191 aa15.08■□□□□ 0
USP4-212ENST00000486549 NUMA1Q14980 2115 aa15.07■□□□□ 0
USP4-212ENST00000486549 WASH4PA8MWX3 477 aa15.07■□□□□ 0
USP4-212ENST00000486549 MID1O15344 667 aa15.07■□□□□ 0
USP4-212ENST00000486549 IL1BP01584 269 aa15.07■□□□□ 0
USP4-212ENST00000486549 ERCC2P18074 760 aa15.07■□□□□ 0
USP4-212ENST00000486549 ARL4AP40617 200 aa15.07■□□□□ 0
USP4-212ENST00000486549 PTGER3P43115 390 aa15.07■□□□□ 0
USP4-212ENST00000486549 SERPINH1P50454 418 aaKnown RBP15.07■□□□□ 0
USP4-212ENST00000486549 VASPP50552 380 aaPredicted RBP15.07■□□□□ 0
USP4-212ENST00000486549 DNA2P51530 1060 aa15.07■□□□□ 0
USP4-212ENST00000486549 CLCN6P51797 869 aa15.07■□□□□ 0
USP4-212ENST00000486549 TAS2R40P59535 323 aa15.07■□□□□ 0
USP4-212ENST00000486549 ELAVL3Q14576 367 aaKnown RBP15.07■□□□□ 0
USP4-212ENST00000486549 CST6Q15828 149 aa15.07■□□□□ 0
USP4-212ENST00000486549 DPYSL2Q16555 572 aa15.07■□□□□ 0
USP4-212ENST00000486549 ZFYVE27Q5T4F4 411 aa15.07■□□□□ 0
USP4-212ENST00000486549 CYP2U1Q7Z449 544 aa15.07■□□□□ 0
USP4-212ENST00000486549 TMTC1Q8IUR5 882 aa15.07■□□□□ 0
USP4-212ENST00000486549 RHOT2Q8IXI1 618 aa15.07■□□□□ 0
USP4-212ENST00000486549 NETO2Q8NC67 525 aa15.07■□□□□ 0
USP4-212ENST00000486549 TEKT4Q8WW24 435 aa15.07■□□□□ 0
USP4-212ENST00000486549 OR8D1Q8WZ84 308 aa15.07■□□□□ 0
USP4-212ENST00000486549 FAM129BQ96TA1 746 aa15.07■□□□□ 0
USP4-212ENST00000486549 GPR174Q9BXC1 333 aa15.07■□□□□ 0
USP4-212ENST00000486549 KLC2Q9H0B6 622 aa15.07■□□□□ 0
USP4-212ENST00000486549 PABPC3Q9H361 631 aaKnown RBP15.07■□□□□ 0
USP4-212ENST00000486549 PCDH18Q9HCL0 1135 aa15.07■□□□□ 0
USP4-212ENST00000486549 WSB2Q9NYS7 404 aaPredicted RBP15.07■□□□□ 0
USP4-212ENST00000486549 IMPACTQ9P2X3 320 aa15.07■□□□□ 0
USP4-212ENST00000486549 LCMT1Q9UIC8 334 aa15.07■□□□□ 0
USP4-212ENST00000486549 INTUQ9ULD6 942 aa15.07■□□□□ 0
USP4-212ENST00000486549 TFR2Q9UP52 801 aa15.07■□□□□ 0
USP4-212ENST00000486549 FCF1Q9Y324 198 aaKnown RBP15.07■□□□□ 0
USP4-212ENST00000486549 PCDHA13Q9Y5I0 950 aa15.07■□□□□ 0
USP4-212ENST00000486549 ATXN2Q99700 1313 aaKnown RBP15.07■□□□□ 0
USP4-212ENST00000486549 A0A1W2PP55 124 aa15.06■□□□□ 0
USP4-212ENST00000486549 GOLGA6L6A8MZA4 724 aa15.06■□□□□ 0
USP4-212ENST00000486549 BUB1O43683 1085 aa15.06■□□□□ 0
USP4-212ENST00000486549 KDELR3O43731 214 aa15.06■□□□□ 0
USP4-212ENST00000486549 NDUFA10O95299 355 aa15.06■□□□□ 0
USP4-212ENST00000486549 LCA5LO95447 670 aa15.06■□□□□ 0
USP4-212ENST00000486549 ZNF806P0C7X5 589 aa15.06■□□□□ 0
USP4-212ENST00000486549 OXTRP30559 389 aa15.06■□□□□ 0
USP4-212ENST00000486549 SLC8A1P32418 973 aa15.06■□□□□ 0
USP4-212ENST00000486549 MAN1A1P33908 653 aa15.06■□□□□ 0
USP4-212ENST00000486549 MPLP40238 635 aa15.06■□□□□ 0
USP4-212ENST00000486549 DPP6P42658 865 aa15.06■□□□□ 0
USP4-212ENST00000486549 NOP2P46087 812 aaKnown RBP15.06■□□□□ 0
USP4-212ENST00000486549 CDH6P55285 790 aa15.06■□□□□ 0
USP4-212ENST00000486549 YBEYP58557 167 aaPredicted RBP15.06■□□□□ 0
USP4-212ENST00000486549 ZBTB16Q05516 673 aa15.06■□□□□ 0
USP4-212ENST00000486549 POM121L1PQ3SYA9 428 aa15.06■□□□□ 0
USP4-212ENST00000486549 PARP15Q460N3 678 aa15.06■□□□□ 0
USP4-212ENST00000486549 ATP13A4Q4VNC1 1196 aa15.06■□□□□ 0
USP4-212ENST00000486549 LYSMD4Q5XG99 296 aa15.06■□□□□ 0
USP4-212ENST00000486549 DSG4Q86SJ6 1040 aa15.06■□□□□ 0
USP4-212ENST00000486549 UMODL1-AS1Q8N2C9 162 aa15.06■□□□□ 0
USP4-212ENST00000486549 CCDC114Q96M63 670 aa15.06■□□□□ 0
USP4-212ENST00000486549 HSPA12BQ96MM6 686 aa15.06■□□□□ 0
USP4-212ENST00000486549 BAG1Q99933 345 aaPredicted RBP15.06■□□□□ 0
USP4-212ENST00000486549 SMOC1Q9H4F8 434 aa15.06■□□□□ 0
USP4-212ENST00000486549 PARD6AQ9NPB6 346 aa15.06■□□□□ 0
USP4-212ENST00000486549 LUC7LQ9NQ29 371 aaKnown RBP15.06■□□□□ 0
USP4-212ENST00000486549 VPS45Q9NRW7 570 aa15.06■□□□□ 0
USP4-212ENST00000486549 FBXL12Q9NXK8 326 aa15.06■□□□□ 0
USP4-212ENST00000486549 DONSONQ9NYP3 566 aa15.06■□□□□ 0
USP4-212ENST00000486549 NCKAP1Q9Y2A7 1128 aa15.06■□□□□ 0
USP4-212ENST00000486549 MFHAS1Q9Y4C4 1052 aa15.06■□□□□ 0
USP4-212ENST00000486549 EPN1Q9Y6I3 576 aaPredicted RBP15.06■□□□□ 0
USP4-212ENST00000486549 DFFAO00273 331 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms