RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 TTC5Q8N0Z6 440 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 VGLL2Q8N8G2 317 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 DNAAF3Q8N9W5 541 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 SYT8Q8NBV8 401 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 CNNM3Q8NE01 707 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 CASKIN2Q8WXE0 1202 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 PRCCQ92733 491 aaPredicted RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 THRSPQ92748 146 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 RILPL2Q969X0 211 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 PPP1R14BQ96C90 147 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 ADAD1Q96M93 576 aaKnown RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 CDK5RAP1Q96SZ6 601 aaKnown RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 EIF3CQ99613 913 aaKnown RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 PDCD2LQ9BRP1 358 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 TEX12Q9BXU0 123 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 API5Q9BZZ5 524 aaKnown RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 CCSER1Q9C0I3 900 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 NDST4Q9H3R1 872 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 OPA3Q9H6K4 179 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 SYNDIG1Q9H7V2 258 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 SMURF2Q9HAU4 748 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 DLL4Q9NR61 685 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 POLR3BQ9NW08 1133 aaPredicted RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 DDX43Q9NXZ2 648 aaKnown RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.67□□□□□ -1.66
RTN4-213ENST00000485749 TMOD2Q9NZR1 351 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 SAE1Q9UBE0 346 aaPredicted RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 FETUBQ9UGM5 382 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 ANGPTL2Q9UKU9 493 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 TBX20Q9UMR3 447 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 NAALADL1Q9UQQ1 740 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 DLGAP4Q9Y2H0 992 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 CCL27Q9Y4X3 112 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 POMT1Q9Y6A1 747 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 FAM169AQ9Y6X4 670 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 COMMD3-BMI1R4GMX3 469 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 CFTRP13569 1480 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 NCAPD3P42695 1498 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 FGD5Q6ZNL6 1462 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 MYBBP1AQ9BQG0 1328 aaKnown RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 ZNF335Q9H4Z2 1342 aaPredicted RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 AATKQ6ZMQ8 1374 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 A0A1B0GUA9 196 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 MBD3L4A6NDZ8 208 aaPredicted RBP4.66□□□□□ -1.66
RTN4-213ENST00000485749 MBD3L3A6NE82 208 aaPredicted RBP4.66□□□□□ -1.66
RTN4-213ENST00000485749 LRRIQ3A6PVS8 624 aaPredicted RBP4.66□□□□□ -1.66
RTN4-213ENST00000485749 A8MV72 311 aaPredicted RBP4.66□□□□□ -1.66
RTN4-213ENST00000485749 A8MXE2 369 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 TTC34A8MYJ7 566 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 ZNF879B4DU55 563 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 HSBP1L1C9JCN9 74 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 F2RL2O00254 374 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 BTN3A1O00481 513 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 PODXLO00592 558 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 NDUFAB1O14561 156 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 CD3EAPO15446 510 aaKnown RBP4.66□□□□□ -1.66
RTN4-213ENST00000485749 KCNQ3O43525 872 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 MLYCDO95822 493 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 CHRNA1P02708 482 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 AMY1AP04745 511 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 ATP5JP18859 108 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 DDCP20711 480 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 GCH1P30793 250 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 RPL9P32969 192 aaKnown RBP4.66□□□□□ -1.66
RTN4-213ENST00000485749 GUCY1A2P33402 732 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 MCM7P33993 719 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 CRHR1P34998 444 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 TRIM23P36406 574 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 SOX8P57073 446 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 DSTNP60981 165 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 NKX3-2P78367 333 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 PRKCEQ02156 737 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 PRKCZQ05513 592 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 CHRNDQ07001 517 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 ASPHQ12797 758 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 SLC13A2Q13183 592 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 RAB32Q13637 225 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 CYLC2Q14093 348 aaPredicted RBP4.66□□□□□ -1.66
RTN4-213ENST00000485749 GNA13Q14344 377 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 VEPH1Q14D04 833 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 RTP5Q14D33 572 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 PFKFB3Q16875 520 aaPredicted RBP4.66□□□□□ -1.66
RTN4-213ENST00000485749 DUSP28Q4G0W2 176 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 FBXO43Q4G163 708 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 GLRA4Q5JXX5 417 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 ATXN7L2Q5T6C5 722 aaPredicted RBP4.66□□□□□ -1.66
RTN4-213ENST00000485749 DEPDC1Q5TB30 811 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 CES4AQ5XG92 561 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 GRAMD4Q6IC98 578 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 OR7E24Q6IFN5 339 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 SULT6B1Q6IMI4 303 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 KRT80Q6KB66 452 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 FBXO38Q6PIJ6 1188 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 C6orf89Q6UWU4 347 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 ABHD15Q6UXT9 468 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 ETV3LQ6ZN32 361 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 ZNF600Q6ZNG1 722 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 CHST3Q7LGC8 479 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 KRT28Q7Z3Y7 464 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 KIAA1328Q86T90 577 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms