RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 ATP9BO43861 1147 aa20.33■□□□□ 0.85
COL6A2-208ENST00000485591 CST8O60676 142 aa20.33■□□□□ 0.85
COL6A2-208ENST00000485591 PRAMEF11O60813 436 aa20.33■□□□□ 0.85
COL6A2-208ENST00000485591 PAPSS2O95340 614 aaPredicted RBP20.33■□□□□ 0.85
COL6A2-208ENST00000485591 MT-CO1P00395 513 aa20.33■□□□□ 0.85
COL6A2-208ENST00000485591 TGM2P21980 687 aa20.33■□□□□ 0.85
COL6A2-208ENST00000485591 ZNF211Q13398 564 aaPredicted RBP20.33■□□□□ 0.85
COL6A2-208ENST00000485591 CRY1Q16526 586 aa20.33■□□□□ 0.85
COL6A2-208ENST00000485591 KAZNQ674X7 775 aa20.33■□□□□ 0.85
COL6A2-208ENST00000485591 BBS12Q6ZW61 710 aa20.33■□□□□ 0.85
COL6A2-208ENST00000485591 LRRC49Q8IUZ0 686 aa20.33■□□□□ 0.85
COL6A2-208ENST00000485591 SLC35F6Q8N357 371 aa20.33■□□□□ 0.85
COL6A2-208ENST00000485591 ATPAF2Q8N5M1 289 aa20.33■□□□□ 0.85
COL6A2-208ENST00000485591 TRIM44Q96DX7 344 aaPredicted RBP20.33■□□□□ 0.85
COL6A2-208ENST00000485591 CARD9Q9H257 536 aa20.33■□□□□ 0.85
COL6A2-208ENST00000485591 SP110Q9HB58 689 aa20.33■□□□□ 0.85
COL6A2-208ENST00000485591 C2orf42Q9NWW7 574 aa20.33■□□□□ 0.85
COL6A2-208ENST00000485591 DTLQ9NZJ0 730 aa20.33■□□□□ 0.85
COL6A2-208ENST00000485591 JRKLQ9Y4A0 524 aa20.33■□□□□ 0.85
COL6A2-208ENST00000485591 ZNF318Q5VUA4 2279 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 A0A1W2PQF6 199 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 CD160O95971 181 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 EPHX1P07099 455 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 HLA-EP13747 358 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 GARSP41250 739 aaKnown RBP20.32■□□□□ 0.84
COL6A2-208ENST00000485591 CXCL12P48061 93 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 NUBP1P53384 320 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 DYNLT1P63172 113 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 SATB1Q01826 763 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 IL10RBQ08334 325 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 ADCY2Q08462 1091 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 SLC10A2Q12908 348 aaPredicted RBP20.32■□□□□ 0.84
COL6A2-208ENST00000485591 STARD3Q14849 445 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 LLGL1Q15334 1064 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 HNRNPA1L2Q32P51 320 aaKnown RBP20.32■□□□□ 0.84
COL6A2-208ENST00000485591 AADACL2Q6P093 401 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 TMEM92Q6UXU6 159 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 ARHGAP36Q6ZRI8 547 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 METTL3Q86U44 580 aaKnown RBP20.32■□□□□ 0.84
COL6A2-208ENST00000485591 ATP11CQ8NB49 1132 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 FRS2Q8WU20 508 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 CASKIN2Q8WXE0 1202 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 HERPUD2Q9BSE4 406 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 CD248Q9HCU0 757 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 PRMT8Q9NR22 394 aaPredicted RBP20.32■□□□□ 0.84
COL6A2-208ENST00000485591 SUN2Q9UH99 717 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 IPO11Q9UI26 975 aaKnown RBP20.32■□□□□ 0.84
COL6A2-208ENST00000485591 SLC8A2Q9UPR5 921 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 CUL9Q8IWT3 2517 aa20.32■□□□□ 0.84
COL6A2-208ENST00000485591 EDDM13A0A1B0GTR0 161 aa20.31■□□□□ 0.84
COL6A2-208ENST00000485591 TTC34A8MYJ7 566 aa20.31■□□□□ 0.84
COL6A2-208ENST00000485591 J3KR12 359 aa20.31■□□□□ 0.84
COL6A2-208ENST00000485591 K7ERQ8 282 aa20.31■□□□□ 0.84
COL6A2-208ENST00000485591 MAFKO60675 156 aa20.31■□□□□ 0.84
COL6A2-208ENST00000485591 MX2P20592 715 aa20.31■□□□□ 0.84
COL6A2-208ENST00000485591 COL9A1P20849 921 aa20.31■□□□□ 0.84
COL6A2-208ENST00000485591 NR2C2P49116 596 aa20.31■□□□□ 0.84
COL6A2-208ENST00000485591 DGKEP52429 567 aa20.31■□□□□ 0.84
COL6A2-208ENST00000485591 CAMK2GQ13555 558 aaPredicted RBP20.31■□□□□ 0.84
COL6A2-208ENST00000485591 INO80DQ53TQ3 878 aaPredicted RBP20.31■□□□□ 0.84
COL6A2-208ENST00000485591 SEL1L2Q5TEA6 688 aa20.31■□□□□ 0.84
COL6A2-208ENST00000485591 C22orf39Q6P5X5 142 aa20.31■□□□□ 0.84
COL6A2-208ENST00000485591 C1orf210Q8IVY1 113 aa20.31■□□□□ 0.84
COL6A2-208ENST00000485591 ZNF366Q8N895 744 aa20.31■□□□□ 0.84
COL6A2-208ENST00000485591 HDAC11Q96DB2 347 aa20.31■□□□□ 0.84
COL6A2-208ENST00000485591 OLFM3Q96PB7 478 aa20.31■□□□□ 0.84
COL6A2-208ENST00000485591 HEMGNQ9BXL5 484 aa20.31■□□□□ 0.84
COL6A2-208ENST00000485591 CEP44Q9C0F1 390 aa20.31■□□□□ 0.84
COL6A2-208ENST00000485591 POLR3BQ9NW08 1133 aaPredicted RBP20.31■□□□□ 0.84
COL6A2-208ENST00000485591 UBA2Q9UBT2 640 aaPredicted RBP20.31■□□□□ 0.84
COL6A2-208ENST00000485591 HEY1Q9Y5J3 304 aa20.31■□□□□ 0.84
COL6A2-208ENST00000485591 KCNK3O14649 394 aa20.3■□□□□ 0.84
COL6A2-208ENST00000485591 LAMTOR5O43504 91 aa20.3■□□□□ 0.84
COL6A2-208ENST00000485591 SMAD6O43541 496 aaKnown RBP20.3■□□□□ 0.84
COL6A2-208ENST00000485591 MAP3K6O95382 1288 aa20.3■□□□□ 0.84
COL6A2-208ENST00000485591 DLG2Q15700 870 aa20.3■□□□□ 0.84
COL6A2-208ENST00000485591 ACCSLQ4AC99 568 aa20.3■□□□□ 0.84
COL6A2-208ENST00000485591 KIAA1211LQ6NV74 962 aa20.3■□□□□ 0.84
COL6A2-208ENST00000485591 NPNTQ6UXI9 565 aa20.3■□□□□ 0.84
COL6A2-208ENST00000485591 LEKR1Q6ZMV7 388 aa20.3■□□□□ 0.84
COL6A2-208ENST00000485591 C17orf53Q8N3J3 647 aaPredicted RBP20.3■□□□□ 0.84
COL6A2-208ENST00000485591 PTPRN2Q92932 1015 aa20.3■□□□□ 0.84
COL6A2-208ENST00000485591 ISG20Q96AZ6 181 aaKnown RBP20.3■□□□□ 0.84
COL6A2-208ENST00000485591 ZNF599Q96NL3 588 aa20.3■□□□□ 0.84
COL6A2-208ENST00000485591 TSGA13Q96PP4 275 aa20.3■□□□□ 0.84
COL6A2-208ENST00000485591 POLMQ9NP87 494 aaPredicted RBP20.3■□□□□ 0.84
COL6A2-208ENST00000485591 ACTL7AQ9Y615 435 aa20.3■□□□□ 0.84
COL6A2-208ENST00000485591 TARSL2A2RTX5 802 aaKnown RBP20.29■□□□□ 0.84
COL6A2-208ENST00000485591 APOC4-APOC2K7ER74 178 aa20.29■□□□□ 0.84
COL6A2-208ENST00000485591 K7ESF4 209 aa20.29■□□□□ 0.84
COL6A2-208ENST00000485591 ENC1O14682 589 aa20.29■□□□□ 0.84
COL6A2-208ENST00000485591 SYNCRIPO60506 623 aaKnown RBP20.29■□□□□ 0.84
COL6A2-208ENST00000485591 TMCC1O94876 653 aa20.29■□□□□ 0.84
COL6A2-208ENST00000485591 TJP3O95049 919 aa20.29■□□□□ 0.84
COL6A2-208ENST00000485591 APOC2P02655 101 aa20.29■□□□□ 0.84
COL6A2-208ENST00000485591 PECAM1P16284 738 aaPredicted RBP20.29■□□□□ 0.84
COL6A2-208ENST00000485591 RFTN1Q14699 578 aaPredicted RBP20.29■□□□□ 0.84
COL6A2-208ENST00000485591 TIGD7Q6NT04 549 aaPredicted RBP20.29■□□□□ 0.84
COL6A2-208ENST00000485591 BZW1Q7L1Q6 419 aaKnown RBP20.29■□□□□ 0.84
COL6A2-208ENST00000485591 CAMKK1Q8N5S9 505 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms