RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 TBC1D1Q86TI0 1168 aaPredicted RBP11.04□□□□□ -0.64
DDX56-212ENST00000485367 MDM1Q8TC05 714 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 AGAP11Q8TF27 550 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 P2RY11Q96G91 374 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 SELENOSQ9BQE4 189 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 EPB41L4BQ9H329 900 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 DLL3Q9NYJ7 618 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 HCN2Q9UL51 889 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 CNTN6Q9UQ52 1028 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 STARD13Q9Y3M8 1113 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 HBS1LQ9Y450 684 aaKnown RBP11.04□□□□□ -0.64
DDX56-212ENST00000485367 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.03□□□□□ -0.64
DDX56-212ENST00000485367 GTPBP10A4D1E9 387 aaKnown RBP11.03□□□□□ -0.64
DDX56-212ENST00000485367 PRRT4C9JH25 899 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 MSI1O43347 362 aaKnown RBP11.03□□□□□ -0.64
DDX56-212ENST00000485367 PENKP01210 267 aaPredicted RBP11.03□□□□□ -0.64
DDX56-212ENST00000485367 CYBBP04839 570 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 RARAP10276 462 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 HOXB2P14652 356 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 FERP16591 822 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 NTSR1P30989 418 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 COPS2P61201 443 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 ARID5AQ03989 594 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 BNIP1Q12981 228 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 BLMHQ13867 455 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 SF3A2Q15428 464 aaKnown RBP11.03□□□□□ -0.64
DDX56-212ENST00000485367 TRIP4Q15650 581 aaPredicted RBP11.03□□□□□ -0.64
DDX56-212ENST00000485367 ARHGAP44Q17R89 818 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 FYB2Q5VWT5 728 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 DPY19L2P1Q6NXN4 242 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 ENOSF1Q7L5Y1 443 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 ERMP1Q7Z2K6 904 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 DAAM2Q86T65 1068 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 CHPFQ8IZ52 775 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 SCML4Q8N228 414 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 CFAP61Q8NHU2 1237 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 CLEC4CQ8WTT0 213 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 DDI1Q8WTU0 396 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 RLN3Q8WXF3 142 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 IRGQQ8WZA9 623 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 ERLEC1Q96DZ1 483 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 SPDL1Q96EA4 605 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 HSFY1Q96LI6 401 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 ACOX2Q99424 681 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 DCHS1Q96JQ0 3298 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 MAP3K13O43283 966 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 THAP12O43422 761 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 MED7O43513 233 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 TSPAN3O60637 253 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 FBXO21O94952 628 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 FGGP02679 453 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 LTFP02788 710 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 VIMP08670 466 aaKnown RBP11.03□□□□□ -0.64
DDX56-212ENST00000485367 TMEM253P0C7T8 217 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 BCKDHBP21953 392 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 CHRNA3P32297 505 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 MAGEA8P43361 318 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 JAM2P57087 298 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 ATP11AP98196 1134 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 FOXK2Q01167 660 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 CREB5Q02930 508 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 CCDC15Q0P6D6 951 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 EXOC3L4Q17RC7 722 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 C11orf74Q86VG3 221 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 SCUBE3Q8IX30 993 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 CPXM2Q8N436 756 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 C12orf50Q8NA57 414 aaPredicted RBP11.03□□□□□ -0.64
DDX56-212ENST00000485367 RFFLQ8WZ73 363 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 FAM81BQ96LP2 452 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 RAB3IPQ96QF0 476 aaPredicted RBP11.03□□□□□ -0.64
DDX56-212ENST00000485367 ELAC2Q9BQ52 826 aaKnown RBP11.03□□□□□ -0.64
DDX56-212ENST00000485367 TRIM7Q9C029 511 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 DPH5Q9H2P9 285 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 SMOC1Q9H4F8 434 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 ACP6Q9NPH0 428 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 CTNNAL1Q9UBT7 734 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 FBXO10Q9UK96 956 aa11.03□□□□□ -0.64
DDX56-212ENST00000485367 ZBTB24O43167 697 aaPredicted RBP11.02□□□□□ -0.65
DDX56-212ENST00000485367 GDF9O60383 454 aa11.02□□□□□ -0.65
DDX56-212ENST00000485367 FOXD2O60548 495 aaPredicted RBP11.02□□□□□ -0.65
DDX56-212ENST00000485367 ATP5HO75947 161 aa11.02□□□□□ -0.65
DDX56-212ENST00000485367 GJB6O95452 261 aa11.02□□□□□ -0.65
DDX56-212ENST00000485367 PON1P27169 355 aa11.02□□□□□ -0.65
DDX56-212ENST00000485367 GNA15P30679 374 aa11.02□□□□□ -0.65
DDX56-212ENST00000485367 MPLP40238 635 aa11.02□□□□□ -0.65
DDX56-212ENST00000485367 GPD2P43304 727 aa11.02□□□□□ -0.65
DDX56-212ENST00000485367 ATXN1P54253 815 aaKnown RBP11.02□□□□□ -0.65
DDX56-212ENST00000485367 HADHBP55084 474 aaKnown RBP11.02□□□□□ -0.65
DDX56-212ENST00000485367 AASDHQ4L235 1098 aaPredicted RBP11.02□□□□□ -0.65
DDX56-212ENST00000485367 MSANTD2Q6P1R3 559 aa11.02□□□□□ -0.65
DDX56-212ENST00000485367 OLIG1Q8TAK6 271 aa11.02□□□□□ -0.65
DDX56-212ENST00000485367 NETO1Q8TDF5 533 aa11.02□□□□□ -0.65
DDX56-212ENST00000485367 ZNF606Q8WXB4 792 aa11.02□□□□□ -0.65
DDX56-212ENST00000485367 GRAMD1AQ96CP6 724 aa11.02□□□□□ -0.65
DDX56-212ENST00000485367 KLHL29Q96CT2 875 aa11.02□□□□□ -0.65
DDX56-212ENST00000485367 THOC1Q96FV9 657 aaKnown RBP11.02□□□□□ -0.65
DDX56-212ENST00000485367 SPACA7Q96KW9 195 aa11.02□□□□□ -0.65
DDX56-212ENST00000485367 PRMT1Q99873 361 aaKnown RBP11.02□□□□□ -0.65
DDX56-212ENST00000485367 APEX2Q9UBZ4 518 aa11.02□□□□□ -0.65
DDX56-212ENST00000485367 CLEC4EQ9ULY5 219 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms