RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 KIAA1143Q96AT1 154 aaPredicted RBP6.57□□□□□ -1.36
CAPN13-206ENST00000485248 TMEM159Q96B96 161 aa6.57□□□□□ -1.36
CAPN13-206ENST00000485248 TMEM74Q96NL1 305 aa6.57□□□□□ -1.36
CAPN13-206ENST00000485248 WDR24Q96S15 920 aa6.57□□□□□ -1.36
CAPN13-206ENST00000485248 ORAI3Q9BRQ5 295 aa6.57□□□□□ -1.36
CAPN13-206ENST00000485248 TTLL2Q9BWV7 592 aa6.57□□□□□ -1.36
CAPN13-206ENST00000485248 SLC12A9Q9BXP2 914 aa6.57□□□□□ -1.36
CAPN13-206ENST00000485248 PABPC3Q9H361 631 aaKnown RBP6.57□□□□□ -1.36
CAPN13-206ENST00000485248 C12orf49Q9H741 205 aa6.57□□□□□ -1.36
CAPN13-206ENST00000485248 ANKZF1Q9H8Y5 726 aa6.57□□□□□ -1.36
CAPN13-206ENST00000485248 LATS2Q9NRM7 1088 aa6.57□□□□□ -1.36
CAPN13-206ENST00000485248 DPP3Q9NY33 737 aa6.57□□□□□ -1.36
CAPN13-206ENST00000485248 LRWD1Q9UFC0 647 aa6.57□□□□□ -1.36
CAPN13-206ENST00000485248 RSPH14Q9UHP6 348 aa6.57□□□□□ -1.36
CAPN13-206ENST00000485248 FZD4Q9ULV1 537 aa6.57□□□□□ -1.36
CAPN13-206ENST00000485248 TP53TG5Q9Y2B4 290 aa6.57□□□□□ -1.36
CAPN13-206ENST00000485248 DERAQ9Y315 318 aa6.57□□□□□ -1.36
CAPN13-206ENST00000485248 LOXL2Q9Y4K0 774 aa6.57□□□□□ -1.36
CAPN13-206ENST00000485248 LRBAP50851 2863 aa6.57□□□□□ -1.36
CAPN13-206ENST00000485248 MED13LQ71F56 2210 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 NBASA2RRP1 2371 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 PRAMEF33A0A0G2JMD5 474 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 A0A1W2PP55 124 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 SLC12A8A0AV02 714 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 TARSL2A2RTX5 802 aaKnown RBP6.56□□□□□ -1.36
CAPN13-206ENST00000485248 H0YCG3 227 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 CPLX1O14810 134 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 HNRNPDLO14979 420 aaKnown RBP6.56□□□□□ -1.36
CAPN13-206ENST00000485248 MUSKO15146 869 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 SLC16A4O15374 487 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 PRAMEF10O60809 474 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 CPNE3O75131 537 aaKnown RBP6.56□□□□□ -1.36
CAPN13-206ENST00000485248 CDKL5O76039 1030 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 CISD3P0C7P0 127 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 PRKAR1AP10644 381 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 RARGP13631 454 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 HGFP14210 728 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 PRF1P14222 555 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 CHKAP35790 457 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 TUBP50607 506 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 PER3P56645 1201 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 HNRNPKP61978 463 aaKnown RBP eCLIP6.56□□□□□ -1.36
CAPN13-206ENST00000485248 CEBPZQ03701 1054 aaKnown RBP6.56□□□□□ -1.36
CAPN13-206ENST00000485248 SRSF11Q05519 484 aaKnown RBP6.56□□□□□ -1.36
CAPN13-206ENST00000485248 GEN1Q17RS7 908 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 SETMARQ53H47 684 aaPredicted RBP6.56□□□□□ -1.36
CAPN13-206ENST00000485248 NUGGCQ68CJ6 796 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 GUSBP11Q6P575 273 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 SHC4Q6S5L8 630 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 THSD4Q6ZMP0 1018 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 ASB18Q6ZVZ8 466 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 HTR3DQ70Z44 454 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 APTXQ7Z2E3 356 aaKnown RBP6.56□□□□□ -1.36
CAPN13-206ENST00000485248 SPATS2Q86XZ4 545 aaKnown RBP6.56□□□□□ -1.36
CAPN13-206ENST00000485248 ADGRF2Q8IZF7 708 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 NUP93Q8N1F7 819 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 JPH3Q8WXH2 748 aaPredicted RBP6.56□□□□□ -1.36
CAPN13-206ENST00000485248 LURAP1Q96LR2 239 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 HS3ST6Q96QI5 342 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 GFM1Q96RP9 751 aaKnown RBP6.56□□□□□ -1.36
CAPN13-206ENST00000485248 IL12RB2Q99665 862 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 CMKLR1Q99788 373 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 SYT15Q9BQS2 421 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 EFHD1Q9BUP0 239 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 CALN1Q9BXU9 219 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 CCSER1Q9C0I3 900 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 C17orf75Q9HAS0 396 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 PREBQ9HCU5 417 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 POLD4Q9HCU8 107 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 FANCLQ9NW38 375 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 UCKL1Q9NWZ5 548 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 DNAJC28Q9NX36 388 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 ARHGAP28Q9P2N2 729 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 ZNF232Q9UNY5 417 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 DMTF1Q9Y222 760 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 ZNF510Q9Y2H8 683 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 KNL1Q8NG31 2342 aa6.56□□□□□ -1.36
CAPN13-206ENST00000485248 SPENQ96T58 3664 aaKnown RBP6.56□□□□□ -1.36
CAPN13-206ENST00000485248 ATP8B3O60423 1300 aa6.55□□□□□ -1.36
CAPN13-206ENST00000485248 NUMA1Q14980 2115 aa6.55□□□□□ -1.36
CAPN13-206ENST00000485248 hCG_2014768A0A024R1R8 64 aa6.55□□□□□ -1.36
CAPN13-206ENST00000485248 A0A087WUV0 522 aaPredicted RBP6.55□□□□□ -1.36
CAPN13-206ENST00000485248 A0A0B4J269 797 aa6.55□□□□□ -1.36
CAPN13-206ENST00000485248 AKR1B15C9JRZ8 316 aaPredicted RBP6.55□□□□□ -1.36
CAPN13-206ENST00000485248 F8VP50 259 aa6.55□□□□□ -1.36
CAPN13-206ENST00000485248 PRAMEF26H0Y7S4 382 aa6.55□□□□□ -1.36
CAPN13-206ENST00000485248 K7ESM1 405 aa6.55□□□□□ -1.36
CAPN13-206ENST00000485248 SCAMP1O15126 338 aa6.55□□□□□ -1.36
CAPN13-206ENST00000485248 OGTO15294 1046 aa6.55□□□□□ -1.36
CAPN13-206ENST00000485248 KIF5CO60282 957 aa6.55□□□□□ -1.36
CAPN13-206ENST00000485248 SHOX2O60902 331 aaPredicted RBP6.55□□□□□ -1.36
CAPN13-206ENST00000485248 DTNBO60941 627 aa6.55□□□□□ -1.36
CAPN13-206ENST00000485248 PIAS2O75928 621 aa6.55□□□□□ -1.36
CAPN13-206ENST00000485248 DEXIO95424 95 aa6.55□□□□□ -1.36
CAPN13-206ENST00000485248 LDLRP01130 860 aa6.55□□□□□ -1.36
CAPN13-206ENST00000485248 ATP5BP06576 529 aaKnown RBP6.55□□□□□ -1.36
CAPN13-206ENST00000485248 OR52Z1P0C646 297 aa6.55□□□□□ -1.36
CAPN13-206ENST00000485248 HOXB4P17483 251 aaPredicted RBP6.55□□□□□ -1.36
CAPN13-206ENST00000485248 BMP6P22004 513 aa6.55□□□□□ -1.36
CAPN13-206ENST00000485248 TNNT3P45378 269 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms