RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 TRPC7Q9HCX4 862 aa17.02■□□□□ 0.32
CTSA-207ENST00000484855 SSU72Q9NP77 194 aaKnown RBP17.02■□□□□ 0.32
CTSA-207ENST00000484855 RPS6KL1Q9Y6S9 549 aa17.02■□□□□ 0.32
CTSA-207ENST00000484855 MTCL1Q9Y4B5 1905 aaKnown RBP17.02■□□□□ 0.32
CTSA-207ENST00000484855 MT-ND3P03897 115 aa17.02■□□□□ 0.31
CTSA-207ENST00000484855 MBL2P11226 248 aaPredicted RBP17.02■□□□□ 0.31
CTSA-207ENST00000484855 NPY2RP49146 381 aa17.02■□□□□ 0.31
CTSA-207ENST00000484855 YBEYP58557 167 aaPredicted RBP17.02■□□□□ 0.31
CTSA-207ENST00000484855 SPANXN3Q5MJ09 141 aa17.02■□□□□ 0.31
CTSA-207ENST00000484855 MARC1Q5VT66 337 aa17.02■□□□□ 0.31
CTSA-207ENST00000484855 HERC6Q8IVU3 1022 aa17.02■□□□□ 0.31
CTSA-207ENST00000484855 C7orf61Q8IZ16 206 aa17.02■□□□□ 0.31
CTSA-207ENST00000484855 UNC5BQ8IZJ1 945 aa17.02■□□□□ 0.31
CTSA-207ENST00000484855 IPMKQ8NFU5 416 aa17.02■□□□□ 0.31
CTSA-207ENST00000484855 GDAP1Q8TB36 358 aa17.02■□□□□ 0.31
CTSA-207ENST00000484855 CDKL2Q92772 493 aa17.02■□□□□ 0.31
CTSA-207ENST00000484855 IL22Q9GZX6 179 aa17.02■□□□□ 0.31
CTSA-207ENST00000484855 ZFP37Q9Y6Q3 630 aaPredicted RBP17.02■□□□□ 0.31
CTSA-207ENST00000484855 ATP9BO43861 1147 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 UGT1A9O60656 530 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 KRT37O76014 449 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 CXCL14O95715 111 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 F11P03951 625 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 KLKB1P03952 638 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 ADH1AP07327 375 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 CA4P22748 312 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 CCT5P48643 541 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 SLC18A1P54219 525 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 IL10RBQ08334 325 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 SERINC3Q13530 473 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 CERCAMQ5T4B2 595 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 LGSNQ5TDP6 509 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 FOXR1Q6PIV2 292 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 CES3Q6UWW8 571 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 ZNF669Q96BR6 464 aaPredicted RBP17.01■□□□□ 0.31
CTSA-207ENST00000484855 PRICKLE1Q96MT3 831 aaPredicted RBP17.01■□□□□ 0.31
CTSA-207ENST00000484855 KLHL5Q96PQ7 755 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 RAD9AQ99638 391 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 RETREG1Q9H6L5 497 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 UGT1A7Q9HAW7 530 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 UGT1A10Q9HAW8 530 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 UGT1A8Q9HAW9 530 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 NT5MQ9NPB1 228 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 SMPD4Q9NXE4 827 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 ASB3Q9Y575 518 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 SLC4A7Q9Y6M7 1214 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 TLL1O43897 1013 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 TYROBPO43914 113 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 LRG1P02750 347 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 SNRPAP09012 282 aaKnown RBP17.01■□□□□ 0.31
CTSA-207ENST00000484855 ACVRL1P37023 503 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 CDH4P55283 916 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 NIPAL4Q0D2K0 466 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 SLC10A7Q0GE19 358 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 PABPC1LQ4VXU2 614 aaKnown RBP17.01■□□□□ 0.31
CTSA-207ENST00000484855 MARK2Q7KZI7 788 aaKnown RBP17.01■□□□□ 0.31
CTSA-207ENST00000484855 SP7Q8TDD2 431 aaPredicted RBP17.01■□□□□ 0.31
CTSA-207ENST00000484855 ALKBH8Q96BT7 664 aaKnown RBP17.01■□□□□ 0.31
CTSA-207ENST00000484855 FICDQ9BVA6 458 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 FSD1LQ9BXM9 530 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 SLC25A51Q9H1U9 297 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 IL21Q9HBE4 155 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 ENTPD7Q9NQZ7 604 aa17.01■□□□□ 0.31
CTSA-207ENST00000484855 AGO1Q9UL18 857 aaKnown RBP17.01■□□□□ 0.31
CTSA-207ENST00000484855 TRIM49D1C9J1S8 452 aa17■□□□□ 0.31
CTSA-207ENST00000484855 GOLGA8RI6L899 631 aa17■□□□□ 0.31
CTSA-207ENST00000484855 CSPG5O95196 566 aa17■□□□□ 0.31
CTSA-207ENST00000484855 CTNNB1P35222 781 aa17■□□□□ 0.31
CTSA-207ENST00000484855 RPA3P35244 121 aaPredicted RBP17■□□□□ 0.31
CTSA-207ENST00000484855 RPS24P62847 133 aaKnown RBP17■□□□□ 0.31
CTSA-207ENST00000484855 RASSF3Q86WH2 238 aa17■□□□□ 0.31
CTSA-207ENST00000484855 ZNF317Q96PQ6 595 aaPredicted RBP17■□□□□ 0.31
CTSA-207ENST00000484855 KLF6Q99612 283 aaPredicted RBP17■□□□□ 0.31
CTSA-207ENST00000484855 TCF25Q9BQ70 676 aa17■□□□□ 0.31
CTSA-207ENST00000484855 MCOLN1Q9GZU1 580 aa17■□□□□ 0.31
CTSA-207ENST00000484855 LCHNA4D1U4 455 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 PMPCBO75439 489 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 KRT38O76015 456 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 USP1O94782 785 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 TPH1P17752 444 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 SERPINB9P50453 376 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 ITKQ08881 620 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 MPP3Q13368 585 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 NAB1Q13506 487 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 ADGRF1Q5T601 910 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 CCDC149Q6ZUS6 474 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 TEX26Q8N6G2 289 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.99■□□□□ 0.31
CTSA-207ENST00000484855 CKAP2Q8WWK9 683 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 WBP2Q969T9 261 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 CERS2Q96G23 380 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 SERAC1Q96JX3 654 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 PAIP2Q9BPZ3 127 aaKnown RBP16.99■□□□□ 0.31
CTSA-207ENST00000484855 DDX50Q9BQ39 737 aaKnown RBP16.99■□□□□ 0.31
CTSA-207ENST00000484855 EMILIN2Q9BXX0 1053 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 FAM237BA0A1B0GVD1 139 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 MAGEB16A2A368 324 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 PRAMEF11O60813 436 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 CLDN11O75508 207 aa16.99■□□□□ 0.31
CTSA-207ENST00000484855 C8AP07357 584 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms