RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CABIN1Q9Y6J0 2220 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 A0A1B0GTW7 788 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 A0A1W2PQJ5 194 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 ARHGAP33O14559 1287 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 TM4SF5O14894 197 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 BCAT2O15382 392 aaPredicted RBP12.56□□□□□ -0.4
MSH5-216ENST00000484309 C7P10643 843 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 GZMAP12544 262 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 RHOQP17081 205 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 C5AR1P21730 350 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 CASP14P31944 242 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 DRD3P35462 400 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 GALCP54803 685 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 ARF5P84085 180 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 ZBED6P86452 979 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 SCAPQ12770 1279 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 GRIK2Q13002 908 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 DAB2IPQ5VWQ8 1189 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 KIAA0895LQ68EN5 471 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 PPP1R2P3Q6NXS1 205 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 C22orf39Q6P5X5 142 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 NCEH1Q6PIU2 408 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.56□□□□□ -0.4
MSH5-216ENST00000484309 MINDY1Q8N5J2 469 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 CHST14Q8NCH0 376 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 OR14C36Q8NHC7 312 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 PIP4K2CQ8TBX8 421 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 GRIN3AQ8TCU5 1115 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 VCPIP1Q96JH7 1222 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 PEBP4Q96S96 227 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 TMEM248Q9NWD8 314 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 PCSK1NQ9UHG2 260 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 ADAMTS1Q9UHI8 967 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 CAPN11Q9UMQ6 739 aa12.56□□□□□ -0.4
MSH5-216ENST00000484309 FCF1Q9Y324 198 aaKnown RBP12.56□□□□□ -0.4
MSH5-216ENST00000484309 TDRD6O60522 2096 aaKnown RBP12.55□□□□□ -0.4
MSH5-216ENST00000484309 A0A1B0GVT2 93 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 TMEM191CA6NGB0 347 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 RNF103O00237 685 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 GIPC1O14908 333 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 MCF2LO15068 1137 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 ZMPSTE24O75844 475 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 SERPING1P05155 500 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 IGHV4-34P06331 123 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 CTSLP07711 333 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 GOT1P17174 413 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 DESP17661 470 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 EPHB2P29323 1055 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 MAPKAPK2P49137 400 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 CSNK1EP49674 416 aaKnown RBP12.55□□□□□ -0.4
MSH5-216ENST00000484309 VASPP50552 380 aaPredicted RBP12.55□□□□□ -0.4
MSH5-216ENST00000484309 DNA2P51530 1060 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 ADPRHP54922 357 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 PPP2CBP62714 309 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 PPP2CAP67775 309 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 CNTN1Q12860 1018 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 NFKBIBQ15653 356 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 CA9Q16790 459 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 PSAPL1Q6NUJ1 521 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 ZNF783Q6ZMS7 281 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 DSG4Q86SJ6 1040 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 ZNF354CQ86Y25 554 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 ARFGAP1Q8N6T3 406 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 NETO2Q8NC67 525 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 DEFB124Q8NES8 71 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 ARHGEF2Q92974 986 aaKnown RBP12.55□□□□□ -0.4
MSH5-216ENST00000484309 PCED1AQ9H1Q7 454 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 FZD4Q9ULV1 537 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 AP4E1Q9UPM8 1137 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 LUC7L2Q9Y383 392 aaKnown RBP12.55□□□□□ -0.4
MSH5-216ENST00000484309 LRRK1Q38SD2 2015 aa12.55□□□□□ -0.4
MSH5-216ENST00000484309 A0A087X0T9 212 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 LRRC72A6NJI9 287 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 C1QTNF3-AMACRE9PGA6 284 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 KPNA3O00505 521 aaPredicted RBP12.54□□□□□ -0.4
MSH5-216ENST00000484309 OPHN1O60890 802 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 RAMP2O60895 175 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 KCNK5O95279 499 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 SYPP08247 313 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 FAM228BP0C875 321 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 L1CAMP32004 1257 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 CHRNA3P32297 505 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 SERPINH1P50454 418 aaKnown RBP12.54□□□□□ -0.4
MSH5-216ENST00000484309 NOVA1P51513 510 aaKnown RBP12.54□□□□□ -0.4
MSH5-216ENST00000484309 TPI1P60174 286 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 FOXK2Q01167 660 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 BNC1Q01954 994 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 SFSWAPQ12872 951 aaKnown RBP12.54□□□□□ -0.4
MSH5-216ENST00000484309 FAM46CQ5VWP2 391 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 RETSATQ6NUM9 610 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 DPY19L3Q6ZPD9 716 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 OR2A12Q8NGT7 310 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 OR2T34Q8NGX1 318 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 C1orf216Q8TAB5 229 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 ARRDC3Q96B67 414 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 SLC6A18Q96N87 628 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 EPAS1Q99814 870 aa12.54□□□□□ -0.4
MSH5-216ENST00000484309 SNRNP25Q9BV90 132 aaKnown RBP12.54□□□□□ -0.4
MSH5-216ENST00000484309 ACE2Q9BYF1 805 aaPredicted RBP12.54□□□□□ -0.4
MSH5-216ENST00000484309 TM6SF2Q9BZW4 377 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms